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fixed a bug in genpoly_modify_lt.py, and a mistake in the vesicle exa…
…mple's README_run.sh file
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...odels/dsDNA_only/2strands/3bp_2particles/nucleoid_binding_protein_IHF/README.md
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...trands/3bp_2particles/nucleoid_binding_protein_IHF/README_convert_tension_to_pressure.txt
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...trands/3bp_2particles/nucleoid_binding_protein_IHF/README_langevin_damping_discussion.txt
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