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Comparing mutation sets above Pango lineage roots #221

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szhan opened this issue Sep 25, 2024 · 0 comments
Open

Comparing mutation sets above Pango lineage roots #221

szhan opened this issue Sep 25, 2024 · 0 comments

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@szhan
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szhan commented Sep 25, 2024

One approach to compare the Viridian UShER tree and our pandemic-scale ARG is to examine the sets of mutations occurring directly above the Pango lineage roots. The Viridian UShER tree (v0.4) has 2,131 Pango lineages labelled. We should take a look at the mutation sets for at least the major lineages.

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