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janelia-cellmap · Nov 19, 2024 · ae8ebeb · ae8ebeb
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diff --git a/_images/0ef52b00ad527f6fce8e8567d6debf197a713489c7736d64fb823ccbe8f54489.png b/_images/0ef52b00ad527f6fce8e8567d6debf197a713489c7736d64fb823ccbe8f54489.png
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diff --git a/_images/b40d3b8736f7145a8fdedb807170b2db4c6419fca7875f53015de0dbcc6cdd50.png b/_images/b40d3b8736f7145a8fdedb807170b2db4c6419fca7875f53015de0dbcc6cdd50.png
diff --git a/_images/c9c4bfe23fa7ad56740e5169aef51a8491920f9509173a32aed236d520ba90c2.png b/_images/c9c4bfe23fa7ad56740e5169aef51a8491920f9509173a32aed236d520ba90c2.png
diff --git a/_sources/autoapi/dacapo/experiments/architectures/cnnectome_unet/index.rst.txt b/_sources/autoapi/dacapo/experiments/architectures/cnnectome_unet/index.rst.txt
@@ -193,6 +193,8 @@ Module Contents
 
 
    .. py:property:: eval_shape_increase
+      :type: funlib.geometry.Coordinate
+
 
       The increase in shape due to the U-Net.
 
@@ -270,6 +272,8 @@ Module Contents
 
 
    .. py:property:: input_shape
+      :type: funlib.geometry.Coordinate
+
 
       Return the input shape of the U-Net.
 

diff --git a/_sources/autoapi/dacapo/experiments/architectures/index.rst.txt b/_sources/autoapi/dacapo/experiments/architectures/index.rst.txt
@@ -749,6 +749,8 @@ Package Contents
 
 
    .. py:property:: eval_shape_increase
+      :type: funlib.geometry.Coordinate
+
 
       The increase in shape due to the U-Net.
 
@@ -826,6 +828,8 @@ Package Contents
 
 
    .. py:property:: input_shape
+      :type: funlib.geometry.Coordinate
+
 
       Return the input shape of the U-Net.
 

diff --git a/_sources/autoapi/dacapo/experiments/tasks/hot_distance_task_config/index.rst.txt b/_sources/autoapi/dacapo/experiments/tasks/hot_distance_task_config/index.rst.txt
@@ -91,3 +91,7 @@ Module Contents
       :type:  bool
 
 
+   .. py:attribute:: kernel_size
+      :type:  int | None
+
+
diff --git a/_sources/autoapi/dacapo/experiments/tasks/index.rst.txt b/_sources/autoapi/dacapo/experiments/tasks/index.rst.txt
@@ -413,6 +413,10 @@ Package Contents
       :type:  List[str]
 
 
+   .. py:attribute:: kernel_size
+      :type:  int | None
+
+
 .. py:class:: OneHotTask(task_config)
 
 
@@ -863,6 +867,10 @@ Package Contents
       :type:  bool
 
 
+   .. py:attribute:: kernel_size
+      :type:  int | None
+
+
 .. py:class:: HotDistanceTask(task_config)
 
 

diff --git a/_sources/autoapi/dacapo/experiments/tasks/one_hot_task_config/index.rst.txt b/_sources/autoapi/dacapo/experiments/tasks/one_hot_task_config/index.rst.txt
@@ -44,3 +44,7 @@ Module Contents
       :type:  List[str]
 
 
+   .. py:attribute:: kernel_size
+      :type:  int | None
+
+
diff --git a/...dacapo/experiments/tasks/post_processors/threshold_post_processor/index.rst.txt b/...dacapo/experiments/tasks/post_processors/threshold_post_processor/index.rst.txt
@@ -4,6 +4,14 @@ dacapo.experiments.tasks.post_processors.threshold_post_processor
 .. py:module:: dacapo.experiments.tasks.post_processors.threshold_post_processor
 
 
+Attributes
+----------
+
+.. autoapisummary::
+
+   dacapo.experiments.tasks.post_processors.threshold_post_processor.logger
+
+
 Classes
 -------
 
@@ -15,6 +23,8 @@ Classes
 Module Contents
 ---------------
 
+.. py:data:: logger
+
 .. py:class:: ThresholdPostProcessor
 
 

diff --git a/...utoapi/dacapo/experiments/tasks/predictors/hot_distance_predictor/index.rst.txt b/...utoapi/dacapo/experiments/tasks/predictors/hot_distance_predictor/index.rst.txt
@@ -25,7 +25,7 @@ Module Contents
 
 .. py:data:: logger
 
-.. py:class:: HotDistancePredictor(channels: List[str], scale_factor: float, mask_distances: bool)
+.. py:class:: HotDistancePredictor(channels: List[str], scale_factor: float, mask_distances: bool, kernel_size: int)
 
 
 
@@ -106,6 +106,9 @@ Module Contents
    This is a subclass of Predictor.
 
 
+   .. py:attribute:: kernel_size
+
+
    .. py:attribute:: channels
 
 

diff --git a/_sources/autoapi/dacapo/experiments/tasks/predictors/index.rst.txt b/_sources/autoapi/dacapo/experiments/tasks/predictors/index.rst.txt
@@ -422,7 +422,7 @@ Package Contents
 
 
 
-.. py:class:: OneHotPredictor(classes: List[str])
+.. py:class:: OneHotPredictor(classes: List[str], kernel_size: int)
 
 
 
@@ -466,6 +466,9 @@ Package Contents
    .. py:attribute:: classes
 
 
+   .. py:attribute:: kernel_size
+
+
    .. py:property:: embedding_dims
 
       Get the number of embedding dimensions.
@@ -1244,7 +1247,7 @@ Package Contents
 
 
 
-.. py:class:: HotDistancePredictor(channels: List[str], scale_factor: float, mask_distances: bool)
+.. py:class:: HotDistancePredictor(channels: List[str], scale_factor: float, mask_distances: bool, kernel_size: int)
 
 
 
@@ -1325,6 +1328,9 @@ Package Contents
    This is a subclass of Predictor.
 
 
+   .. py:attribute:: kernel_size
+
+
    .. py:attribute:: channels
 
 

diff --git a/...ces/autoapi/dacapo/experiments/tasks/predictors/one_hot_predictor/index.rst.txt b/...ces/autoapi/dacapo/experiments/tasks/predictors/one_hot_predictor/index.rst.txt
@@ -25,7 +25,7 @@ Module Contents
 
 .. py:data:: logger
 
-.. py:class:: OneHotPredictor(classes: List[str])
+.. py:class:: OneHotPredictor(classes: List[str], kernel_size: int)
 
 
 
@@ -69,6 +69,9 @@ Module Contents
    .. py:attribute:: classes
 
 
+   .. py:attribute:: kernel_size
+
+
    .. py:property:: embedding_dims
 
       Get the number of embedding dimensions.
Original file line number	Diff line number	Diff line change
Expand Up		@@ -91,3 +91,7 @@ Module Contents
		:type: bool


		.. py:attribute:: kernel_size
		:type: int \| None
Original file line number	Diff line number	Diff line change
Expand Up		@@ -44,3 +44,7 @@ Module Contents
		:type: List[str]


		.. py:attribute:: kernel_size
		:type: int \| None