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24 Open 39 Closed
24 Open 39 Closed
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Issues list

Comparison of MS segmentation models on MP2RAGE images
#81 opened May 29, 2024 by Nilser3
1
Brain-spinal cord MS lesion segmentation on MP2RAGE images
#80 opened Jan 16, 2024 by Nilser3
1
Different sform between native image and derivatives
#77 opened Sep 16, 2023 by jcohenadad
15
Test MS segmentation models in 3T 7T MP2RAGE from Marseille
#74 opened Jun 19, 2023 by Nilser3
5 tasks done
1
Train model with smaller kernel size
#72 opened Mar 10, 2023 by jcohenadad
Release r20230210 has inaccurate suffix _lesion-manualNeuroPoly
#70 opened Feb 27, 2023 by joshuacwnewton
1
Release r20230210 has changed the model name (missing ms_)
#69 opened Feb 14, 2023 by joshuacwnewton
Use mirroring instead of zero-padding when cropping images
#68 opened Feb 11, 2023 by jcohenadad
1
Explain model size differences
#66 opened Feb 10, 2023 by jcohenadad
Try ensembling/bagging for prediction
#63 opened Jan 30, 2023 by jcohenadad
5
Fix ground truth for ef09a994b1bd8dae70fea7d811c89dfae7f52025
#59 opened Jan 25, 2023 by jcohenadad
Optimize data augmentation for 3D kernel epic
#57 opened Dec 17, 2022 by jcohenadad
1 of 3 tasks
8
Upload SC segmentations to database
#55 opened Dec 17, 2022 by jcohenadad
@jcohenadad
Fix manual spinal cord segmentations
#54 opened Dec 17, 2022 by jcohenadad
Subjects to check
#53 opened Dec 17, 2022 by jcohenadad
Consider 'hiding' the spinal cord cropping inside the MS lesion segmentation task
#45 opened Jan 26, 2022 by jcohenadad
Is dilation necessary at inference time?
#44 opened Jan 26, 2022 by jcohenadad
@uzaymacar
3
Make sure to produce JSON files with appropriate target_suffix to be used by 3rd party software
#43 opened Jan 26, 2022 by jcohenadad
3
Account for partial volume effects using SoftSeg training
#42 opened Jan 26, 2022 by uzaymacar
2 tasks done
1
Update README with correct version of ivadomed OR expose the log file from your model folder
#33 opened Jan 14, 2022 by jcohenadad
1
Use wandb.io for parameter comparison
#21 opened Dec 17, 2021 by jcohenadad
@uzaymacar
Document procedure for manually fixing SC segmentations
#14 opened Dec 10, 2021 by jcohenadad
1 of 3 tasks
2
Preparing data and train model to detect/segment spinal cord
#8 opened Dec 7, 2021 by jcohenadad
3 of 6 tasks
6
Find good strategy to 'hide' the preprocessing at inference time
#1 opened Nov 30, 2021 by jcohenadad
ProTip! Exclude everything labeled bug with -label:bug.