Fix auto-detection of binary data (#350) #113
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| name: Build | |
| on: | |
| push: | |
| branches: ["master"] | |
| pull_request: | |
| branches: ["master"] | |
| # If a Second Commit is Pushed After, and Build is Not Complete, Cancel | |
| # Extremely Important with the High Computation Time and Power Required of Arm Linux Builds | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build-linux-x86-64: | |
| name: Linux x86-64 gcc-${{ matrix.gcc-version }} cmake-${{ matrix.cmake-version }} | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| # Oldest supported gcc and cmake versions | |
| - gcc-version: 9 | |
| cmake-version: 3.10.2 | |
| # Latest supported gcc and cmake versions | |
| - gcc-version: 12 | |
| cmake-version: latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: "recursive" | |
| - name: Install dependencies | |
| run: | | |
| sudo apt-get update -q -y | |
| sudo apt-get install -q -y gcc-${{ matrix.gcc-version }} g++-${{ matrix.gcc-version}} libeigen3-dev libboost-dev | |
| - name: Setup cmake | |
| uses: jwlawson/actions-setup-cmake@v2 | |
| with: | |
| cmake-version: ${{ matrix.cmake-version }} | |
| - name: Build | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake .. -DCMAKE_C_COMPILER=$(which gcc-${{ matrix.gcc-version }}) -DCMAKE_CXX_COMPILER=$(which g++-${{ matrix.gcc-version }}) | |
| make -j | |
| file iqtree2 | grep x86-64 | |
| build-linux-aarch64: | |
| name: Linux aarch64 | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: "recursive" | |
| - name: Build on Linux ARM64 | |
| uses: uraimo/run-on-arch-action@v2 | |
| with: | |
| arch: aarch64 | |
| distro: ubuntu_latest | |
| githubToken: ${{ github.token }} | |
| dockerRunArgs: | | |
| --volume "${PWD}:/iqtree2" | |
| install: | | |
| apt-get update -q -y | |
| apt-get install -q -y cmake gcc g++ file libeigen3-dev libboost-dev | |
| run: | | |
| cd /iqtree2 | |
| mkdir build | |
| cd build | |
| cmake .. | |
| make -j | |
| file iqtree2 | grep aarch64 | |
| build-macos-x86_64: | |
| name: Mac OS x86-64 | |
| runs-on: macos-13 # Mac OS 14 Does Not Support x86-64 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: "recursive" | |
| - name: Install dependencies | |
| run: brew install make eigen boost libomp | |
| - name: Build | |
| run: | | |
| set -x | |
| mkdir build | |
| cd build | |
| export LDFLAGS="-L/usr/local/opt/libomp/lib" | |
| export CPPFLAGS="-I/usr/local/opt/libomp/include" | |
| export CXXFLAGS="-I/usr/local/opt/libomp/include" | |
| cmake .. -DCMAKE_C_COMPILER=clang -DCMAKE_CXX_COMPILER=clang++ | |
| gmake -j | |
| file iqtree2 | grep x86_64 | |
| build-macos-arm: | |
| name: Mac OS ARM64 | |
| runs-on: macos-14 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: "recursive" | |
| - name: Install dependencies | |
| run: brew install make eigen boost libomp | |
| - name: Build | |
| run: | | |
| set -x | |
| mkdir build | |
| cd build | |
| export LDFLAGS="-L/opt/homebrew/opt/libomp/lib" | |
| export CPPFLAGS="-I/opt/homebrew/opt/libomp/include" | |
| export CXXFLAGS="-I/opt/homebrew/opt/libomp/include" | |
| cmake .. -DCMAKE_C_COMPILER=clang -DCMAKE_CXX_COMPILER=clang++ | |
| gmake -j | |
| file iqtree2 | grep arm64 | |
| build-windows-x86-64: | |
| name: Windows x86-64 | |
| runs-on: windows-2022 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: "recursive" | |
| - name: Install LLVM v14 | |
| shell: cmd | |
| run: choco install llvm --version=14.0.6 --allow-downgrade | |
| - name: Install Boost | |
| uses: MarkusJx/[email protected] | |
| id: install-boost | |
| with: | |
| boost_version: 1.84.0 | |
| platform_version: 2022 | |
| toolset: mingw | |
| - name: Install Eigen3 | |
| shell: cmd | |
| run: choco install eigen | |
| - name: Compile | |
| shell: cmd | |
| run: | | |
| if exist build rd /s /q build | |
| mkdir build | |
| cd build | |
| cmake -G "MinGW Makefiles" ^ | |
| -DCMAKE_C_COMPILER=clang -DCMAKE_CXX_COMPILER=clang++ ^ | |
| -DCMAKE_C_FLAGS=--target=x86_64-pc-windows-gnu ^ | |
| -DCMAKE_CXX_FLAGS=--target=x86_64-pc-windows-gnu ^ | |
| -DCMAKE_MAKE_PROGRAM=mingw32-make ^ | |
| -DBoost_INCLUDE_DIR=${{steps.install-boost.outputs.BOOST_ROOT}}/include ^ | |
| -DBoost_LIBRARY_DIRS=${{steps.install-boost.outputs.BOOST_ROOT}}/lib ^ | |
| -DIQTREE_FLAGS="cpp14" .. | |
| make -j | |
| env: | |
| BOOST_ROOT: ${{ steps.install-boost.outputs.BOOST_ROOT }} | |
| - name: Check File Arch | |
| shell: bash | |
| run: | | |
| cd build | |
| file iqtree2.exe | grep x86-64 |