[pre-commit.ci] pre-commit autoupdate #1101
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Test | |
| on: | |
| pull_request: | |
| push: | |
| branches-ignore: | |
| - "pre-commit-ci*" | |
| concurrency: | |
| group: >- | |
| ${{ github.workflow }}- | |
| ${{ github.ref_type }}- | |
| ${{ github.event.pull_request.number || github.sha }} | |
| cancel-in-progress: true | |
| env: | |
| # UTF-8 content may be interpreted as ascii and causes errors without this. | |
| LANG: C.UTF-8 | |
| IPP_DISABLE_JS: "1" | |
| JUPYTER_PLATFORM_DIRS: "1" | |
| jobs: | |
| test: | |
| runs-on: ${{ matrix.runs_on || 'ubuntu-20.04' }} | |
| timeout-minutes: 20 | |
| strategy: | |
| # Keep running even if one variation of the job fail | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - python: "3.9" | |
| cluster_type: ssh | |
| - python: "3.8" | |
| cluster_type: mpi | |
| - python: "3.10" | |
| cluster_type: slurm | |
| container: slurmctld | |
| - python: "3.8" | |
| - python: "3.10" | |
| env: | |
| IPP_CONTROLLER_IP: "*" | |
| - python: "3.9" | |
| env: | |
| IPP_ENABLE_CURVE: "1" | |
| - python: "3.8" | |
| runs_on: windows-2019 | |
| - python: "3.9" | |
| runs_on: macos-11 | |
| - python: "3.11" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Cache conda environment | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| ~/conda | |
| key: conda | |
| - name: Cache node_modules | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| node_modules | |
| key: ${{ runner.os }}-yarn-${{ hashFiles('yarn.lock') }} | |
| restore-keys: | | |
| ${{ runner.os }}-yarn- | |
| - name: Set environment variables | |
| if: ${{ matrix.env }} | |
| env: | |
| MATRIX_ENV: ${{ toJSON(matrix.env) }} | |
| run: | | |
| python3 <<EOF | |
| import json | |
| import os | |
| matrix_env = json.loads(os.environ["MATRIX_ENV"]) | |
| with open(os.environ["GITHUB_ENV"], "a") as f: | |
| for key, value in matrix_env.items(): | |
| f.write(f"{key}={value}\n") | |
| EOF | |
| - name: Set up docker-compose for ssh launcher | |
| if: ${{ matrix.cluster_type == 'ssh' }} | |
| run: | | |
| export DOCKER_BUILDKIT=1 | |
| export COMPOSE_DOCKER_CLI_BUILD=1 | |
| cd ci/ssh | |
| docker-compose up -d --build | |
| - name: Set up slurm | |
| if: ${{ matrix.cluster_type == 'slurm' }} | |
| run: | | |
| export DOCKER_BUILDKIT=1 | |
| export COMPOSE_DOCKER_CLI_BUILD=1 | |
| cd ci/slurm | |
| docker-compose up -d --build | |
| - name: Install Python (conda) ${{ matrix.python }} | |
| if: ${{ matrix.cluster_type == 'mpi' }} | |
| run: | | |
| export MAMBA_ROOT_PREFIX=$HOME/conda | |
| test -d $MAMBA_ROOT_PREFIX || mkdir $MAMBA_ROOT_PREFIX | |
| wget -qO- https://micro.mamba.pm/api/micromamba/linux-64/latest | tar -xvj bin/micromamba | |
| eval "$(./bin/micromamba shell hook -s posix)" | |
| micromamba activate | |
| micromamba install -y -c conda-forge mpich mpi4py python=${{ matrix.python }} | |
| echo "PATH=$MAMBA_ROOT_PREFIX/bin:$PATH" >> $GITHUB_ENV | |
| - name: Install Python ${{ matrix.python }} | |
| if: ${{ matrix.cluster_type != 'mpi' }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Install ipyparallel itself | |
| run: | | |
| pip install --upgrade pip | |
| pip install --no-deps . | |
| - name: Install Python dependencies | |
| run: | | |
| pip install --pre --upgrade ipyparallel[test] | |
| - name: Install extra Python packages | |
| if: ${{ ! startsWith(matrix.python, '3.11') }} | |
| run: | | |
| pip install distributed joblib | |
| pip install --only-binary :all: matplotlib || echo "no matplotlib" | |
| - name: Show environment | |
| run: pip freeze | |
| - name: Run tests in container ${{ matrix.container }} | |
| if: ${{ matrix.container }} | |
| run: echo "EXEC=docker exec -i ${{ matrix.container }}" >> $GITHUB_ENV | |
| - name: Run ${{ matrix.cluster_type }} tests | |
| if: ${{ matrix.cluster_type }} | |
| run: | | |
| ${EXEC:-} pytest -v --maxfail=2 --cov=ipyparallel ipyparallel/tests/test_${{ matrix.cluster_type }}.py | |
| - name: Run tests | |
| if: ${{ ! matrix.cluster_type }} | |
| run: | | |
| pytest -v --maxfail=3 --cov=ipyparallel | |
| - name: Fixup coverage permissions ${{ matrix.container }} | |
| if: ${{ matrix.container }} | |
| run: | | |
| ls -l .coverage* | |
| ${EXEC} chmod -R a+rw .coverage* | |
| - name: Submit codecov report | |
| uses: codecov/codecov-action@v3 | |
| - name: Report on slurm | |
| if: ${{ matrix.cluster_type == 'slurm' && failure() }} | |
| run: | | |
| set -x | |
| docker ps -a | |
| docker logs slurmctld | |
| docker exec -i slurmctld squeue --states=all | |
| docker exec -i slurmctld sinfo | |
| docker logs c1 | |
| docker logs c2 |