Merge branch 'dev' into uniquac_dev #798
Workflow file for this run
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| name: CI | |
| on: [push, pull_request, release] | |
| jobs: | |
| tests_and_coverage: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: [3.9] | |
| toolchain: | |
| - {compiler: gcc, version: 10} | |
| - {compiler: gcc, version: 11} | |
| - {compiler: gcc, version: 12} | |
| - {compiler: gcc, version: 13} | |
| - {compiler: intel, version: '2024.1'} | |
| - {compiler: intel, version: '2023.2'} | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| with: | |
| submodules: false | |
| - name: Setup Fortran Compiler | |
| uses: fortran-lang/setup-fortran@v1 | |
| id: setup-fortran | |
| with: | |
| compiler: ${{ matrix.toolchain.compiler }} | |
| version: ${{ matrix.toolchain.version }} | |
| - name: Install Python | |
| uses: actions/setup-python@v1 # Use pip to install latest CMake, & FORD/Jin2For, etc. | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Setup Graphviz | |
| uses: ts-graphviz/setup-graphviz@v1 | |
| - name: Setup Fortran Package Manager | |
| uses: fortran-lang/setup-fpm@v4 | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install ford numpy matplotlib gcovr numpy scipy | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| sudo apt-get install libnlopt-dev | |
| - name: Run tests without coverage | |
| if: ${{ env.FC != 'gfortran' }} | |
| run: | | |
| fpm test --profile release --flag "-g" --compiler ${{ env.FC }} --c-compiler gcc | |
| - name: Run tests with coverage | |
| if: ${{ env.FC == 'gfortran' }} | |
| run: | | |
| fpm test --profile release --flag "-g -coverage" --compiler ${{ env.FC }} --c-compiler gcc | |
| bash ci/ci.sh | |
| - name: Coverage | |
| run: bash ci/ci.sh coverage | |
| if: ${{ env.FC == 'gfortran' }} | |
| - name: Upload coverage reports to Codecov | |
| if: ${{ env.FC == 'gfortran' }} | |
| uses: codecov/[email protected] | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| slug: ipqa-research/yaeos | |
| Python-API: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ["3.12"] | |
| toolchain: | |
| - {compiler: gcc, version: 13} | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| with: | |
| submodules: false | |
| - name: Install Python | |
| uses: actions/setup-python@v1 # Use pip to install latest CMake, & FORD/Jin2For, etc. | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| sudo apt-get install libnlopt-dev pandoc | |
| - name: install tox | |
| run: | | |
| pip install tox tox-gh-actions | |
| - name: Setup Fortran Compiler | |
| uses: fortran-lang/setup-fortran@v1 | |
| id: setup-fortran | |
| with: | |
| compiler: ${{ matrix.toolchain.compiler }} | |
| version: ${{ matrix.toolchain.version }} | |
| - name: Run tox | |
| run: | | |
| cd python && tox -r | |
| build_wheels: | |
| needs: Python-API | |
| name: Build wheels on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] #, windows-latest, macos-13, macos-14] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| # Used to host cibuildwheel | |
| - uses: actions/setup-python@v5 | |
| # Install gfortran on each OS | |
| - name: Setup Fortran Compiler | |
| uses: fortran-lang/setup-fortran@v1 | |
| id: setup-fortran | |
| with: | |
| compiler: gcc | |
| version: 12 | |
| # Install fpm for Windows | |
| - name: Install fpm | |
| uses: fortran-lang/setup-fpm@v5 | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| # CiBuildWheel | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install cibuildwheel==2.19.2 | |
| - name: Build wheels | |
| run: python -m cibuildwheel python/ --output-dir wheelhouse --debug-traceback | |
| # to supply options, put them in 'env', like: | |
| env: | |
| # CIBW_BUILD_VERBOSITY: 3 | |
| CIBW_BUILD_FRONTEND: build | |
| # MACOSX_DEPLOYMENT_TARGET: "13.0" | |
| CIBW_BEFORE_TEST: pip install pytest | |
| CIBW_TEST_COMMAND: pytest {project}/python/tests --import-mode=importlib | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: cibw-wheels-${{ matrix.os }} | |
| path: ./wheelhouse/*.whl | |
| publish_to_testpypi: | |
| name: Publish Python 🐍 wheels 🛞 to PyPI | |
| if: github.event_name == 'release' | |
| needs: build_wheels | |
| runs-on: ubuntu-latest | |
| environment: | |
| name: pypi | |
| url: https://test.pypi.org/p/yaeos | |
| permissions: | |
| id-token: write # IMPORTANT: mandatory for trusted publishing | |
| steps: | |
| - name: Download all the dists | |
| uses: actions/download-artifact@v4 | |
| with: | |
| path: dist/ | |
| pattern: cibw-wheels-* | |
| merge-multiple: true | |
| - run: ls -R dist | |
| - name: Publish distribution 📦 to PyPI | |
| uses: pypa/gh-action-pypi-publish@release/v1 |