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QC viewer #850

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merged 43 commits into from
Dec 17, 2024
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3be3d22
get_protocol_period: relax assertion for spacer_times
bimac Sep 25, 2024
a607f24
lower alpha for event markers
bimac Sep 25, 2024
68beb14
some cleaning-up
bimac Sep 25, 2024
9f99ce6
remove unused rolenames from DataFrameTableModel, various small fixes
bimac Sep 25, 2024
bfbe100
Update task_qc.py
bimac Sep 25, 2024
6ae91f6
add ColoredDataFrameTableModel
bimac Sep 25, 2024
5644b35
Update ViewEphysQC.py
bimac Sep 25, 2024
074b01a
Update ViewEphysQC.py
bimac Sep 25, 2024
9203f04
Update ViewEphysQC.py
bimac Sep 25, 2024
2f8a5c9
Update ViewEphysQC.py
bimac Sep 26, 2024
4b4b063
moveable sections, tooltips for header
bimac Sep 26, 2024
ddbad74
speed up sort and color handling
bimac Sep 26, 2024
2fbc5c6
add filter for column names
bimac Sep 26, 2024
7bfcf72
Update ViewEphysQC.py
bimac Sep 26, 2024
f227b9a
Update ViewEphysQC.py
bimac Sep 26, 2024
fd30945
allow pinning of columns to that they won't be filtered
bimac Sep 26, 2024
520441c
correct location of context menu popup
bimac Sep 26, 2024
54b0df0
happy colors
bimac Sep 27, 2024
cdbbed5
add signals & slots for ColoredDataFrameTableModel, alpha slider
bimac Sep 27, 2024
57ce078
add picker for colormap
bimac Sep 27, 2024
61fbb6c
Update ViewEphysQC.py
bimac Sep 27, 2024
da50ac9
separate normalization from rgba calculation
bimac Sep 28, 2024
027c2ea
dynamic handling of text color
bimac Sep 28, 2024
7f6dbb6
switch to using pyqtgraph's colormaps
bimac Sep 28, 2024
5608ec1
filter by tokens
bimac Sep 29, 2024
02e9a2c
move models to iblqt
bimac Oct 1, 2024
af0abe3
fix stim freeze indexing issue in ephys_fpga extraction
oliche Oct 2, 2024
4a3627f
change ITI constants from 1s to 500ms
bimac Oct 3, 2024
04ef5bc
sort dataframe, store UI settings
bimac Oct 4, 2024
72aec0f
Update requirements.txt
bimac Oct 4, 2024
c6d480b
add passing status of individual tests
bimac Oct 4, 2024
4c58d00
require iblqt >= 0.2.0
bimac Oct 9, 2024
af96df2
Resolves #853
k1o0 Oct 15, 2024
bbf915d
Revert "Resolves #853"
bimac Oct 16, 2024
4cb2ee3
Remove 'peakVelocity_times` from QC trials table
bimac Oct 16, 2024
f32005d
Revert "Remove 'peakVelocity_times` from QC trials table"
bimac Oct 16, 2024
5e54694
Reapply "Resolves #853"
bimac Oct 16, 2024
a2a5d96
Merge branch 'develop' into qc_viewer
k1o0 Oct 16, 2024
01848f3
Merge branch 'develop' into qc_viewer
bimac Dec 17, 2024
8bfa7e3
Update requirements.txt
bimac Dec 17, 2024
fb3ea31
fix CI
bimac Dec 17, 2024
74c6fda
Merge branch 'qc_viewer' of github.com:int-brain-lab/ibllib into qc_v…
bimac Dec 17, 2024
ad682fe
Update task_qc.py
bimac Dec 17, 2024
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require iblqt >= 0.2.0
  • Loading branch information
bimac committed Oct 9, 2024
commit 4c58d00345ded61c2ca94ae2aa65f6aefac7c9ad
2 changes: 1 addition & 1 deletion ibllib/qc/task_qc_viewer/ViewEphysQC.py
Original file line number Diff line number Diff line change
Expand Up @@ -171,7 +171,7 @@ def pinColumn(self, pin: bool, idx: int | None = None):

def changeFilter(self, string: str):
headers = [
self.tableModel.headerData(x, Qt.Horizontal, Qt.DisplayRole).value().lower()
self.tableModel.headerData(x, Qt.Horizontal, Qt.DisplayRole).lower()
for x in range(self.tableModel.columnCount())
]
tokens = [y.lower() for y in (x.strip() for x in string.split(',')) if len(y)]
Expand Down
2 changes: 1 addition & 1 deletion requirements.txt
Original file line number Diff line number Diff line change
Expand Up @@ -25,7 +25,7 @@ tqdm>=4.32.1
iblatlas>=0.5.3
ibl-neuropixel>=1.0.1
iblutil>=1.11.0
iblqt>=0.1.2
iblqt>=0.2.0
mtscomp>=1.0.1
ONE-api~=2.9.rc0
phylib>=2.6.0
Expand Down