To show the data collected by the Contributions sub-team of our group, we made two data apps with RStudio's shiny package. The first one shows users the graphs of the growth of Synechococcus CB0101 under different iron concentrations. A user can view the graphs with Secchi Depth measurements or OD measurements. The second app is a calculator that allows users to convert Secchi depth to either OD or cell count based on our measurements of cyanobacteria (Synechococcus CB0101) and yeast (Saccharomyces cerevisiae). A protocol for how we grew and measured Synechococcus CB0101 is available on our wiki.
The attached zip folder contains two Rmarkdown files (.Rmd) which can executed in R to run the too apps. Alternatively, the apps are hosted on Shiny app server at the following urls: