Robot Updated at:31 Aug 2024 21:09:17 GMT

docs/awesome/awesome-agi-cocosci.md

@@ -42,7 +42,7 @@ Contributions are greatly welcomed! Please refer to [Contribution Guidelines](ht
 
 * [Non-monotonic Logic](https://plato.stanford.edu/entries/logic-nonmonotonic/) - ***Plato Stanford***. A computational philosophy account on Non-monotonic Logic, a family of formal frameworks devised to capture and represent defeasible inference.
 
-* [Philosophical Writings of Peirce](https://4lib.org/book/702071/e8ffe8) - ***Courier Corporation***, 1955. [[All Versions](https://scholar.google.com/scholar?cluster=3917019015464129592&hl=en&as_sdt=0,5)]. Original writings by C. S. Peirce, the establisher of Abduction.
+* [Philosophical Writings of Peirce](https://4lib.org/book/702071/e8ffe8) - ***Courier Corporation***, 1955. [[All Versions](https://scholar.google.com/scholar?cluster=3917019015464129592)]. Original writings by C. S. Peirce, the philosopher who first introduces the concept of Abduction.
 
 * [The Inference to the Best Explanation](https://www.jstor.org/stable/2183532) - ***Philosophical Review***, 1965. [[All Versions](https://scholar.google.com/scholar?cluster=1416627814151433560&hl=en&as_sdt=0,5)]. Lipton's original paper on Inference to the Best Explanation as a special case of Abduction.
 

docs/awesome/awesome-angular.md

@@ -326,6 +326,7 @@ become an Angular expert.
 * [angular-webxr-art-sample](https://github.com/google-gemini/angular-webxr-art-sample) - A WebXR Gallery that creates Generative AI images using [Vertex AI Image Generation](https://cloud.google.com/vertex-ai/generative-ai/docs/image/overview) and creates captioning using [Gemini Multimodel API](https://cloud.google.com/vertex-ai/generative-ai/docs/multimodal/overview#multimodal_models).
 * [global seo](https://www.globalseo.ai/integrations/angular) - Translate Angular app with AI.
 * [deep-chat](https://github.com/OvidijusParsiunas/deep-chat) - Fully customizable AI chatbot component for your website.
+* [abbi-ng-ai-image-descriptor](https://github.com/slsfi/abbi-ng-ai-image-descriptor) - Angular web app for AI-generated image descriptions. You need an OpenAI API key to use the tool.
 
 #### Analytics
 
@@ -604,6 +605,7 @@ become an Angular expert.
 * [gradient-able-free-admin-template](https://github.com/codedthemes/gradient-able-free-admin-template) - Gradient able free bootstrap, angular, react admin template.
 * [mantis-free-angular-admin-template](https://github.com/codedthemes/mantis-free-angular-admin-template)
 * [datta-able-free-angular-admin-template](https://github.com/codedthemes/datta-able-free-angular-admin-template)
+* [angular-templates](https://github.com/hawkgs/angular-templates) - A set of Angular templates for common web apps.
 
 ##### Paid
 
@@ -659,6 +661,8 @@ become an Angular expert.
 * [angular-unit-test-helper](https://github.com/duluca/angular-unit-test-helper) - Helper functions to help write unit tests in Angular using mocks and spies.
 * [ngentest](https://github.com/allenhwkim/ngentest) - Angular6+ Unit Test Generator For Components, Directive, Services, and Pipes.
 * [angular-testing-kit](https://github.com/babybeet/angular-testing-kit) - A set of convenient utilities to make Angular testing with Jasmine and Karma simpler.
+* [nightwatch-plugin-angular](https://github.com/nightwatchjs/nightwatch-plugin-angular) - Official [Nightwatch](https://nightwatchjs.org/) plugin which adds component testing support for Angular apps. It uses the Webpack DevServer under the hood. Requires Nightwatch 2.4+.
+* [Puppeteer Angular Schematic](https://pptr.dev/guides/ng-schematics/#getting-started) - Adds [Puppeteer-based](https://github.com/puppeteer/puppeteer) e2e tests to your Angular project.
 
 #### Updating
 
@@ -1223,6 +1227,7 @@ for the creation of web applications developed with Angular.
 * [ngx-flagr](https://github.com/pBouillon/ngx-flagr) - Effortless feature flag management in Angular.
 * [module-federation-plugin](https://github.com/angular-architects/module-federation-plugin) - Module Federation allows loading separately compiled and deployed code (like micro frontends or plugins) into an application. This plugin makes Module Federation work together with Angular and the CLI.
 * [ng2-idle](https://github.com/moribvndvs/ng2-idle) - A module for responding to idle users in Angular applications.
+* [ng2-gauge](https://github.com/hawkgs/ng2-gauge) - SVG gauge component for Angular.
 
 ---
 

docs/awesome/awesome-cmake.md

@@ -157,6 +157,7 @@ These provide a wide range of functionality - from dealing with compiler flags t
 * [cmake-examples](https://github.com/pr0g/cmake-examples) - A collection of as simple as possible, modern CMake projects. [```[MIT]```][MIT]
 * [cpp-project](https://github.com/bsamseth/cpp-project) - Boiler plate for C++ projects - tests, CI, coverage, docs. [```[UNLICENSE]```][UNLICENSE]
 * [ModernCppStarter](https://github.com/TheLartians/ModernCppStarter) - A template for modern C++ projects using CMake, CI, code coverage, clang-format, reproducible dependency management, tests using [doctest](https://github.com/onqtam/doctest) and much more. [```[UNLICENSE]```][UNLICENSE]
+* [SeeMake](https://github.com/MhmRhm/SeeMake) - A feature-packed, ready-to-use CMake template with testing, static and dynamic checks, coverage reports, and more. [```[MIT]```][MIT]
 
 ## Other
 

docs/awesome/awesome-computational-biology.md

@@ -24,6 +24,10 @@ A knowledge collection of databases, software and papers related to computationa
 - [Rhea](https://www.rhea-db.org/) - Database of chemical reactions.
 - [Drug Repurposing Hub](https://repo-hub.broadinstitute.org/repurposing#download-data) - Collections of drug repurposing data containing drug, moa, target etc.
 - [Therapeutic Target Database](https://idrblab.net/ttd/full-data-download) - collections of drug-target, target-disease, and drug-disease dataset.
+- [ZINC ligand discovery database](https://zinc.docking.org/) - Free database of commercially-available compounds for virtual screening.
+- [MoleculeNet](http://moleculenet.ai/) - Benchmark for molecular machine learning.
+- [Ames Mutagenicity dataset](https://www.sciencedirect.com/science/article/abs/pii/S0166354220302412) - Dataset for predicting mutagenicity.
+- [ADCdb](https://www.antibody-drug.com/) - Database for antibody-drug conjugates.
 ### Pathway
 - [PathwayCommons](https://www.pathwaycommons.org/) - Database of Pathways and Interactions.
 - [KEGG PATHWAY](https://www.genome.jp/kegg/pathway.html) - Collection fo drawn pathway maps.
@@ -36,11 +40,21 @@ A knowledge collection of databases, software and papers related to computationa
 - [PROTEIN DATA BANK](https://www.rcsb.org/) - Database of the 3D shapes of proteins, nucleic acids, and complex assemblies.
 - [UniProt](https://www.uniprot.org/) - The collection of functional information on proteins.
 - [AlphaFold Protein Structure Database](https://alphafold.ebi.ac.uk/api-docs) - Database of 3D protein structures.
+- [RCSB Protein Data Bank (PDB)](https://www.rcsb.org/) - Repository of 3D structural data of large biological molecules.
+- [Critical Assessment of Structure Prediction (CASP)](https://predictioncenter.org/) - Experiment for advancing the methods of predicting protein structure from sequence.
+- [Uniclust](https://uniclust.mmseqs.com/) - Collection of clustered protein sequence databases.
+- [CATH database](https://www.cathdb.info/) - Hierarchical classification of protein domain structures.
 ### Genome
 - [Human Genome Resources at NCBI](https://www.ncbi.nlm.nih.gov/projects/genome/guide/human/index.shtml) - Database of image, proteomics, transcriptomics and systems biology.
 - [GenBank](https://www.ncbi.nlm.nih.gov/genbank/) - Database of genetic sequence offered by NCBI.
 - [UCSC Genome Browser](https://genome.ucsc.edu/) - Genome blowser offered by UCSC.
 - [cBioPortal](https://www.cbioportal.org/) - Database of Cancer Genomics. This has overall metaview for a lot of patients.
+- [10x Genomics Dataset](https://www.10xgenomics.com/resources/datasets) - Collection of single-cell datasets.
+- [The Genotype-Tissue Expression (GTEx)](https://gtexportal.org/home/) - Resource for studying human gene expression and regulation.
+- [Dependency Map (DepMap)](https://depmap.org/portal/) - Genome-wide CRISPR-Cas9 screens in cancer cell lines.
+- [Catalogue Of Somatic Mutations In Cancer (COSMIC)](https://cancer.sanger.ac.uk/cosmic) - Comprehensive resource for exploring somatic mutations in human cancers.
+- [MGnify](https://www.ebi.ac.uk/metagenomics/) - Free resource for archiving, analysis, and browsing of metagenomic and metatranscriptomic data.
+- [JASPAR](http://jaspar.genereg.net/) - Open-access database of curated, non-redundant transcription factor binding profiles.
 ### Disease
 - [KEGG DRUG](https://www.genome.jp/kegg/drug/) - Comprehensive drug information resource for approved drugs.
 - [DrugBank](https://www.drugbank.com/) - A database of drug and target maintained by the University of Alberta.
@@ -54,16 +68,24 @@ A knowledge collection of databases, software and papers related to computationa
   - [NCI60](https://dtp.cancer.gov/discovery_development/nci-60/) A database which focus on 60 cancer cell lines with many drugs.
   - [Genomics of Drug Sensitivity in Cancer (GDSC)](https://www.cancerrxgene.org/) - A database of drug sensitibity which has 1000 human cancer cell lines and 100s compounds.
   - [Cancer Cell Line Encyclopedia](https://sites.broadinstitute.org/ccle/) - A database of cancer cell lines. This has 1000 cell lines.
+  - [CellMiner Cross Database (CellMinerCDB)](https://discover.nci.nih.gov/cellminercdb/) - Integration of multiple cancer cell line databases.
 - Chemical Protein Interaction
   - [STITCH](http://stitch.embl.de/) - A database of Chemical Protein Interaction.
   - [BindingDB](https://www.bindingdb.org/rwd/bind/index.jsp) - A database of compounds and targes.
+  - [PDBBind](http://www.pdbbind.org.cn/) - Database of experimentally measured binding affinity data for biomolecular complexes.
+  - [CrossDocked2020](https://arxiv.org/abs/2001.01037) - Large-scale dataset for machine learning in structure-based virtual screening.
 - Protein-Protein Interaction
   - [STRING](https://string-db.org/) - Protein-Protein Interaction Networks for several organisms.
   - [BioGRID](https://thebiogrid.org/) - Database of Protein, Genetic and Chemical Interactions.
   - [HIPPIE](http://cbdm-01.zdv.uni-mainz.de/~mschaefer/hippie/) - Human Protein-Protein Interaction database.
 - Knowledge Graph
   - [Drug Mechanism Database (DrugMechDB)](https://github.com/SuLab/DrugMechDB/tree/2.0.1): database of the mechanism of action from a drug to a disease.
   - [DRKG](https://github.com/gnn4dr/DRKG) - A library for biological knowledge graph.
+### Clinical Trial
+- [ClinicalTrials.gov](https://clinicaltrials.gov/) - Database of privately and publicly funded clinical studies.
+- [ICD10](https://icd.who.int/browse10/2019/en) - International Classification of Diseases, 10th revision.
+- [EU Drug Regulating Authorities Clinical Trials DB (EudraCT)](https://eudract.ema.europa.eu/) - European database of clinical trials.
+- [MIMIC-IV](https://mimic.mit.edu/) - Freely accessible critical care database.
 
 ## API
 - [PubMed esearch](https://www.nlm.nih.gov/dataguide/edirect/esearch.html): API for searching articles in PubMed.

docs/awesome/awesome-geek-podcasts.md

@@ -28,6 +28,7 @@ A curated list of podcasts we like to listen to.
 * [Advent of Computing](https://adventofcomputing.com/) - A podcast about the shocking, intriguing, and all too often relevant history of computing.
 * [AdminAdmin Podcast](https://adminadminpodcast.co.uk) - A podcast about system administration and (increasingly) DevOps and Cloud operations.
 * [Android Developers Backstage](http://androidbackstage.blogspot.com/) - Android Backstage, a podcast by and for Android developers. Hosted by developers from the Android engineering team, this show covers topics of interest to Android programmers, with in-depth discussions and interviews with engineers on the Android team at Google.
+* [APIs over IPAs](https://www.moesif.com/blog/podcasts) - A podcast about how to build an API-first business.
 * [Around IT In 256 Seconds](https://256.nurkiewicz.com/) - Podcast for developers, testers, SREs… and their managers. I explain complex and convoluted technologies in a clear way, avoiding buzzwords and hype. Never longer than 4 minutes and 16 seconds.
 * [Away From The Keyboard](http://awayfromthekeyboard.com/category/podcasts/) - Away From The Keyboard is where technologists tell their stories of how they started, how they grew, how they learned, and how they unwind.
 * [Away from Keyboard](https://changelog.com/afk) – Exploring the human side of creative work.

docs/awesome/awesome-terraform.md

@@ -397,6 +397,7 @@ For more Community Modules not listed here please see the [Terraform Module Regi
 - [tfprovidercheck](https://github.com/suzuki-shunsuke/tfprovidercheck) - CLI to prevent malicious Terraform Providers from being executed
 - [tfproviderlint](https://github.com/bflad/tfproviderlint) - Terraform Provider Lint Tool.
 - [tfrepl](https://github.com/ysoftwareab/tfrepl) - A Terraform REPL, giving you a full shell experience. Readline based. No dependencies. Save config changes. History.
+- [tfreveal](https://github.com/breml/tfreveal) - A Terraform utility to show Terraform plans with all the secret (sensitive) values revealed.
 - [tfscaffold](https://github.com/tfutils/tfscaffold) - Framework for controlling multi-environment multi-component terraform-managed AWS infrastructure.
 - [tfschema](https://github.com/minamijoyo/tfschema) - Schema inspector for Terraform providers.
 - [tfsec](https://github.com/aquasecurity/tfsec) - Terraform static analysis tool that supports terraform <0.12 & >=0.12 & directly integrates with HCL parser for better results.

docs/awesome/static-analysis.md

@@ -1324,6 +1324,8 @@ TSLint is an extensible static analysis tool that checks TypeScript code for rea
 
 - [CodeSonar from GrammaTech](https://codesecure.com/our-products/codesonar/) :copyright: — Advanced, whole program, deep path, static analysis of C, C++, Java and C# with easy-to-understand explanations and code and path visualization.
 
+- [Codety](https://www.codety.io) :copyright: — Codety Scanner is a comprehensive source code scanner that embeds 5000+ static code analysis rules, which aim to detect code issues for 20+ programming languages and IaC tools.
+
 - [Codiga](https://www.codiga.io) :copyright: — Automated Code Reviews and Technical Debt management platform that supports 12+ languages.
 
 - [Corrode](https://github.com/jameysharp/corrode) :warning: — Semi-automatic translation from C to Rust. Could reveal bugs in the original implementation by showing Rust compiler warnings and errors. Superseded by C2Rust.