hyperspy · ericpre · Mar 17, 2024 · Mar 13, 2024 · Mar 13, 2024
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -1,7 +1,7 @@
 repos:
   - repo: https://github.com/astral-sh/ruff-pre-commit
     # Ruff version.
-    rev: v0.2.2
+    rev: v0.3.2
     hooks:
       # Run the linter.
       - id: ruff

diff --git a/exspy/components/__init__.py b/exspy/components/__init__.py
@@ -1,4 +1,4 @@
-"""Components """
+"""Components"""
 
 from .eels_arctan import EELSArctan
 from .eels_cl_edge import EELSCLEdge

diff --git a/exspy/components/eels_vignetting.py b/exspy/components/eels_vignetting.py
@@ -23,7 +23,6 @@
 
 
 class Vignetting(Component):
-
     """
     Model the vignetting of the lens with a cos^4 law multiplied by lines on
     the edges

diff --git a/exspy/components/pes_core_line_shape.py b/exspy/components/pes_core_line_shape.py
@@ -32,7 +32,6 @@ def _calculate_shirley_background(values):
 
 
 class PESCoreLineShape(Component):
-
     """ """
 
     def __init__(self, A=1.0, FWHM=1.0, origin=0.0, ab=0.0, shirley=0.0):

diff --git a/exspy/docstrings/model.py b/exspy/docstrings/model.py
@@ -17,9 +17,8 @@
 # along with eXSpy. If not, see <https://www.gnu.org/licenses/#GPL>.
 
 
-"""Common docstring snippets for model.
+"""Common docstring snippets for model."""
 
-"""
 from exspy.misc.eels.gosh_gos import _GOSH_DOI
 
 GOS_PARAMETER = """GOS : 'hydrogenic', 'gosh', 'Hartree-Slater'.

diff --git a/exspy/misc/eels/eelsdb.py b/exspy/misc/eels/eelsdb.py
@@ -18,6 +18,7 @@
 
 
 """This module provides tools to interact with The EELS Database."""
+
 import requests
 import logging
 

diff --git a/exspy/misc/eels/hartree_slater_gos.py b/exspy/misc/eels/hartree_slater_gos.py
@@ -68,7 +68,6 @@
 
 
 class HartreeSlaterGOS(TabulatedGOS):
-
     """Read Hartree-Slater Generalized Oscillator Strength parametrized
     from files.
 

diff --git a/exspy/misc/eels/hydrogenic_gos.py b/exspy/misc/eels/hydrogenic_gos.py
@@ -64,7 +64,6 @@
 
 
 class HydrogenicGOS(BaseGOS):
-
     """Computes the K and L GOS using R. Egerton's  routines.
 
     Parameters

diff --git a/exspy/models/__init__.py b/exspy/models/__init__.py
@@ -1,4 +1,4 @@
-"""Models """
+"""Models"""
 
 from .edsmodel import EDSModel
 from .edssemmodel import EDSSEMModel

diff --git a/exspy/models/edsmodel.py b/exspy/models/edsmodel.py
@@ -97,7 +97,6 @@ def _get_scale(E1, E_ref1, fact):
 
 
 class EDSModel(Model1D):
-
     """Build and fit a model of an EDS Signal1D.
 
     Parameters

diff --git a/exspy/models/edssemmodel.py b/exspy/models/edssemmodel.py
@@ -20,7 +20,6 @@
 
 
 class EDSSEMModel(EDSModel):
-
     """Build and fit a model to EDS data acquired in the SEM.
 
     Parameters

diff --git a/exspy/models/edstemmodel.py b/exspy/models/edstemmodel.py
@@ -20,7 +20,6 @@
 
 
 class EDSTEMModel(EDSModel):
-
     """Build and fit a model to EDS data acquired in the TEM.
 
     Parameters

diff --git a/exspy/signals/__init__.py b/exspy/signals/__init__.py
@@ -16,6 +16,7 @@
     For dielectric function data with ``signal_dimension`` equal one. The signal
     is unbinned by default.
 """
+
 from .dielectric_function import DielectricFunction, LazyDielectricFunction
 from .eds import EDSSpectrum, LazyEDSSpectrum
 from .eds_sem import EDSSEMSpectrum, LazyEDSSEMSpectrum

diff --git a/exspy/signals/dielectric_function.py b/exspy/signals/dielectric_function.py
@@ -29,7 +29,6 @@
 
 
 class DielectricFunction(ComplexSignal1D):
-
     """Signal class for dielectric functions."""
 
     _signal_type = "DielectricFunction"
@@ -172,7 +171,6 @@ def get_electron_energy_loss_spectrum(self, zlp, t):
 
 
 class LazyDielectricFunction(DielectricFunction, LazyComplexSignal1D):
-
     """Lazy signal class for dielectric functions."""
 
     __doc__ += LAZYSIGNAL_DOC.replace("__BASECLASS__", "DielectricFunction")
diff --git a/exspy/signals/eds_sem.py b/exspy/signals/eds_sem.py
@@ -50,7 +50,6 @@ class EDSSEMParametersUI(BaseSetMetadataItems):
 
 
 class EDSSEMSpectrum(EDSSpectrum):
-
     """Signal class for EDS spectra measured in an SEM."""
 
     _signal_type = "EDS_SEM"
@@ -316,7 +315,6 @@ def create_model(self, auto_background=True, auto_add_lines=True, *args, **kwarg
 
 
 class LazyEDSSEMSpectrum(EDSSEMSpectrum, LazyEDSSpectrum):
-
     """Lazy signal class for EDS spectra measured in an SEM."""
 
     __doc__ += LAZYSIGNAL_DOC.replace("__BASECLASS__", "EDSSEMSpectrum")
diff --git a/exspy/signals/eds_tem.py b/exspy/signals/eds_tem.py
@@ -69,7 +69,6 @@ class EDSTEMParametersUI(BaseSetMetadataItems):
 
 
 class EDSTEMSpectrum(EDSSpectrum):
-
     """Signal class for EDS spectra measured in an TEM."""
 
     _signal_type = "EDS_TEM"
@@ -984,7 +983,6 @@ def CL_get_mass_thickness(weight_percent, thickness):
 
 
 class LazyEDSTEMSpectrum(EDSTEMSpectrum, LazyEDSSpectrum):
-
     """Lazy signal class for EDS spectra measured in an TEM."""
 
     __doc__ += LAZYSIGNAL_DOC.replace("__BASECLASS__", "EDSTEMSpectrum")
diff --git a/exspy/signals/eels.py b/exspy/signals/eels.py
@@ -75,7 +75,6 @@ class EELSTEMParametersUI(BaseSetMetadataItems):
 
 
 class EELSSpectrum(Signal1D):
-
     """Signal class for EELS spectra."""
 
     _signal_type = "EELS"
@@ -2026,7 +2025,6 @@ def vacuum_mask(
 
 
 class LazyEELSSpectrum(EELSSpectrum, LazySignal1D):
-
     """Lazy signal class for EELS spectra."""
 
     __doc__ += LAZYSIGNAL_DOC.replace("__BASECLASS__", "EELSSpectrum")
-Original file line number
+Diff line change
@@ Expand Up / @@ -23,7 +23,6 @@ @@
     class Vignetting(Component):
         """
         Model the vignetting of the lens with a cos^4 law multiplied by lines on
         the edges
@@ Expand Down @@
Original file line number	Diff line number	Diff line change
Expand Up		@@ -32,7 +32,6 @@ def _calculate_shirley_background(values):


		class PESCoreLineShape(Component):

		""" """

		def __init__(self, A=1.0, FWHM=1.0, origin=0.0, ab=0.0, shirley=0.0):
Expand Down
Original file line number	Diff line number	Diff line change
Expand Up		@@ -18,6 +18,7 @@


		"""This module provides tools to interact with The EELS Database."""

		import requests
		import logging

Expand Down
Original file line number	Diff line number	Diff line change
Expand Up		@@ -68,7 +68,6 @@


		class HartreeSlaterGOS(TabulatedGOS):

		"""Read Hartree-Slater Generalized Oscillator Strength parametrized
		from files.

Expand Down
Original file line number	Diff line number	Diff line change
Expand Up		@@ -64,7 +64,6 @@


		class HydrogenicGOS(BaseGOS):

		"""Computes the K and L GOS using R. Egerton's routines.

		Parameters
Expand Down
Original file line number	Diff line number	Diff line change
Expand Up		@@ -97,7 +97,6 @@ def _get_scale(E1, E_ref1, fact):


		class EDSModel(Model1D):

		"""Build and fit a model of an EDS Signal1D.

		Parameters
Expand Down
Original file line number	Diff line number	Diff line change
Expand Up		@@ -20,7 +20,6 @@


		class EDSSEMModel(EDSModel):

		"""Build and fit a model to EDS data acquired in the SEM.

		Parameters
Expand Down
Original file line number	Diff line number	Diff line change
Expand Up		@@ -20,7 +20,6 @@


		class EDSTEMModel(EDSModel):

		"""Build and fit a model to EDS data acquired in the TEM.

		Parameters
Expand Down