Update docs build

hyperspy · Mar 11, 2024 · e1583e9 · e1583e9
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diff --git a/.buildinfo b/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: cb6e02e71991307036122df414a67b52
+config: 1cc1c2f27c9ed1fa65883121740a1a51
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip b/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip
diff --git a/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip b/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip
diff --git a/_images/sphx_glr_simple_arctan_fit_001.png b/_images/sphx_glr_simple_arctan_fit_001.png
diff --git a/_images/sphx_glr_simple_arctan_fit_thumb.png b/_images/sphx_glr_simple_arctan_fit_thumb.png
diff --git a/_sources/auto_examples/model_fitting/EELS_curve_fitting.rst.txt b/_sources/auto_examples/model_fitting/EELS_curve_fitting.rst.txt
@@ -38,7 +38,7 @@ png file.
 
  .. code-block:: none
 
-      0%|                                              | 0.00/42.3M [00:00<?, ?B/s]      0%|                                      | 46.1k/42.3M [00:00<02:12, 319kB/s]      0%|                                       | 125k/42.3M [00:00<01:31, 460kB/s]      1%|▍                                     | 515k/42.3M [00:00<00:28, 1.49MB/s]      3%|█                                    | 1.15M/42.3M [00:00<00:15, 2.68MB/s]      6%|██▎                                  | 2.66M/42.3M [00:00<00:06, 6.20MB/s]     13%|████▋                                | 5.33M/42.3M [00:00<00:03, 12.1MB/s]     21%|███████▋                             | 8.72M/42.3M [00:00<00:01, 18.4MB/s]     27%|██████████▏                          | 11.6M/42.3M [00:00<00:01, 19.8MB/s]     35%|████████████▊                        | 14.6M/42.3M [00:01<00:01, 22.7MB/s]     41%|███████████████▎                     | 17.5M/42.3M [00:01<00:01, 24.6MB/s]     49%|██████████████████                   | 20.6M/42.3M [00:01<00:00, 24.1MB/s]     56%|████████████████████▋                | 23.7M/42.3M [00:01<00:00, 26.0MB/s]     63%|███████████████████████▍             | 26.8M/42.3M [00:01<00:00, 27.5MB/s]     71%|██████████████████████████▏          | 29.9M/42.3M [00:01<00:00, 28.5MB/s]     78%|████████████████████████████▉        | 33.1M/42.3M [00:01<00:00, 29.4MB/s]     85%|███████████████████████████████▌     | 36.0M/42.3M [00:01<00:00, 27.5MB/s]     93%|██████████████████████████████████▎  | 39.2M/42.3M [00:01<00:00, 28.7MB/s]      0%|                                              | 0.00/42.3M [00:00<?, ?B/s]    100%|██████████████████████████████████████| 42.3M/42.3M [00:00<00:00, 270GB/s]
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@@ -68,7 +68,7 @@ png file.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 7.541 seconds)
+   **Total running time of the script:** (0 minutes 10.525 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_EELS_curve_fitting.py:

diff --git a/_sources/auto_examples/model_fitting/plot_residual.rst.txt b/_sources/auto_examples/model_fitting/plot_residual.rst.txt
@@ -110,15 +110,15 @@ Fit for all navigation positions:
 
  .. code-block:: none
 
-    Exception ignored in: <function tqdm.__del__ at 0x7f73bb6c25c0>
+    Exception ignored in: <function tqdm.__del__ at 0x7f6aca93a2a0>
     Traceback (most recent call last):
       File "/opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/tqdm/std.py", line 1148, in __del__
         self.close()
       File "/opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/tqdm/notebook.py", line 279, in close
         self.disp(bar_style='danger', check_delay=False)
         ^^^^^^^^^
     AttributeError: 'tqdm_notebook' object has no attribute 'disp'
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+      0%|          | 0/10 [00:00<?, ?it/s]    100%|██████████| 10/10 [00:00<00:00, 1362.14it/s]
 
 
 
@@ -164,7 +164,7 @@ sphinx_gallery_thumbnail_number = 2
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.517 seconds)
+   **Total running time of the script:** (0 minutes 0.558 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_plot_residual.py:

diff --git a/_sources/auto_examples/model_fitting/sg_execution_times.rst.txt b/_sources/auto_examples/model_fitting/sg_execution_times.rst.txt
@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:08.417** total execution time for 3 files **from auto_examples/model_fitting**:
+**00:11.449** total execution time for 3 files **from auto_examples/model_fitting**:
 
 .. container::
 
@@ -33,11 +33,11 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_auto_examples_model_fitting_EELS_curve_fitting.py` (``EELS_curve_fitting.py``)
-     - 00:07.541
+     - 00:10.525
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_plot_residual.py` (``plot_residual.py``)
-     - 00:00.517
+     - 00:00.558
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_simple_arctan_fit.py` (``simple_arctan_fit.py``)
-     - 00:00.358
+     - 00:00.367
      - 0.0
diff --git a/_sources/auto_examples/model_fitting/simple_arctan_fit.rst.txt b/_sources/auto_examples/model_fitting/simple_arctan_fit.rst.txt
@@ -42,9 +42,9 @@ Fit an arctan function.
     Active: True
     Parameter Name |    Free |      Value |        Std |        Min |        Max | Linear
     ============== | ======= | ========== | ========== | ========== | ========== | ======
-                 A |    True | 1.00402124 | 0.00214365 |       None |       None |   True
-                 k |    True | 1.00345924 | 0.08525131 |       None |       None |  False
-                x0 |    True | 0.04986170 | 0.07930434 |       None |       None |  False
+                 A |    True | 1.00084717 | 0.00218131 |       None |       None |   True
+                 k |    True | 0.96730770 | 0.08226537 |       None |       None |  False
+                x0 |    True | -0.0173244 | 0.08249536 |       None |       None |  False
 
 
 
@@ -91,7 +91,7 @@ Fit an arctan function.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.358 seconds)
+   **Total running time of the script:** (0 minutes 0.367 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_simple_arctan_fit.py:

diff --git a/_sources/sg_execution_times.rst.txt b/_sources/sg_execution_times.rst.txt
@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:08.417** total execution time for 3 files **from all galleries**:
+**00:11.449** total execution time for 3 files **from all galleries**:
 
 .. container::
 
@@ -33,11 +33,11 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_auto_examples_model_fitting_EELS_curve_fitting.py` (``../examples/model_fitting/EELS_curve_fitting.py``)
-     - 00:07.541
+     - 00:10.525
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_plot_residual.py` (``../examples/model_fitting/plot_residual.py``)
-     - 00:00.517
+     - 00:00.558
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_simple_arctan_fit.py` (``../examples/model_fitting/simple_arctan_fit.py``)
-     - 00:00.358
+     - 00:00.367
      - 0.0
diff --git a/auto_examples/model_fitting/EELS_curve_fitting.html b/auto_examples/model_fitting/EELS_curve_fitting.html
@@ -471,25 +471,35 @@
 <p>Performs curve fitting to an EELS spectrum, plots the result and saves it as
 png file.</p>
 <img src="../../_images/sphx_glr_EELS_curve_fitting_001.png" srcset="../../_images/sphx_glr_EELS_curve_fitting_001.png" alt="coreloss_spectrum Signal" class = "sphx-glr-single-img"/><div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>  0%|                                              | 0.00/42.3M [00:00&lt;?, ?B/s]
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   0%|                                              | 0.00/42.3M [00:00&lt;?, ?B/s]
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 </pre></div>
 </div>
 <div class="line-block">
@@ -511,7 +521,7 @@
 <a href="https://hyperspy.org/hyperspy-doc/dev/reference/base_classes/model/model1d.html#hyperspy.models.model1d.Model1D.plot" title="hyperspy.models.model1d.Model1D.plot" class="sphx-glr-backref-module-hyperspy-models-model1d sphx-glr-backref-type-py-method"><span class="n">m</span><span class="o">.</span><span class="n">plot</span></a><span class="p">()</span>
 </pre></div>
 </div>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 7.541 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 10.525 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-model-fitting-eels-curve-fitting-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../../_downloads/037b5aa4752b41748abf69bba9d1cbe4/EELS_curve_fitting.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">EELS_curve_fitting.ipynb</span></code></a></p>

diff --git a/auto_examples/model_fitting/plot_residual.html b/auto_examples/model_fitting/plot_residual.html
@@ -492,7 +492,7 @@
 <div class="highlight-Python notranslate"><div class="highlight"><pre><span></span><a href="https://hyperspy.org/hyperspy-doc/dev/reference/base_classes/model/basemodel.html#hyperspy.model.BaseModel.multifit" title="hyperspy.model.BaseModel.multifit" class="sphx-glr-backref-module-hyperspy-model sphx-glr-backref-type-py-method"><span class="n">m</span><span class="o">.</span><span class="n">multifit</span></a><span class="p">()</span>
 </pre></div>
 </div>
-<div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>Exception ignored in: &lt;function tqdm.__del__ at 0x7f73bb6c25c0&gt;
+<div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>Exception ignored in: &lt;function tqdm.__del__ at 0x7f6aca93a2a0&gt;
 Traceback (most recent call last):
   File &quot;/opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/tqdm/std.py&quot;, line 1148, in __del__
     self.close()
@@ -502,7 +502,7 @@
 AttributeError: &#39;tqdm_notebook&#39; object has no attribute &#39;disp&#39;
 
   0%|          | 0/10 [00:00&lt;?, ?it/s]
-100%|██████████| 10/10 [00:00&lt;00:00, 1495.72it/s]
+100%|██████████| 10/10 [00:00&lt;00:00, 1362.14it/s]
 </pre></div>
 </div>
 <p>Plot the fitted model with residual:</p>
@@ -514,7 +514,7 @@
 <li><img src="../../_images/sphx_glr_plot_residual_002.png" srcset="../../_images/sphx_glr_plot_residual_002.png" alt="Signal" class = "sphx-glr-multi-img"/></li>
 </ul>
 <p>sphinx_gallery_thumbnail_number = 2</p>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.517 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.558 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-model-fitting-plot-residual-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../../_downloads/971c2906ad663020c2e6701928a24c9a/plot_residual.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">plot_residual.ipynb</span></code></a></p>