Update docs build

hyperspy · Feb 16, 2024 · b547b61 · b547b61
1 parent 13a3229
commit b547b61
Show file tree

Hide file tree

Showing 16 changed files with 62 additions and 61 deletions.
diff --git a/.buildinfo b/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: c2e7fe0ae63614827e3435933dbd1a08
+config: f2c72d0bf469fcc9747d8790cbddc772
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip b/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip
diff --git a/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip b/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip
diff --git a/_images/sphx_glr_simple_arctan_fit_001.png b/_images/sphx_glr_simple_arctan_fit_001.png
diff --git a/_images/sphx_glr_simple_arctan_fit_thumb.png b/_images/sphx_glr_simple_arctan_fit_thumb.png
diff --git a/_sources/auto_examples/model_fitting/EELS_curve_fitting.rst.txt b/_sources/auto_examples/model_fitting/EELS_curve_fitting.rst.txt
@@ -38,7 +38,7 @@ png file.
 
  .. code-block:: none
 
-      0%|                                              | 0.00/42.3M [00:00<?, ?B/s]      0%|                                      | 12.3k/42.3M [00:00<06:26, 109kB/s]      0%|                                      | 44.0k/42.3M [00:00<03:20, 211kB/s]      0%|                                      | 90.1k/42.3M [00:00<02:20, 301kB/s]      0%|▏                                      | 203k/42.3M [00:00<01:13, 575kB/s]      1%|▎                                     | 414k/42.3M [00:00<00:40, 1.04MB/s]      2%|▊                                     | 855k/42.3M [00:00<00:20, 2.01MB/s]      4%|█▌                                   | 1.76M/42.3M [00:00<00:10, 3.96MB/s]      8%|███                                  | 3.54M/42.3M [00:00<00:05, 7.71MB/s]     14%|█████                                | 5.78M/42.3M [00:01<00:03, 11.5MB/s]     19%|██████▉                              | 7.86M/42.3M [00:01<00:02, 13.6MB/s]     24%|████████▊                            | 10.1M/42.3M [00:01<00:02, 15.4MB/s]     29%|██████████▋                          | 12.2M/42.3M [00:01<00:01, 16.5MB/s]     34%|████████████▋                        | 14.4M/42.3M [00:01<00:01, 17.4MB/s]     39%|██████████████▌                      | 16.6M/42.3M [00:01<00:01, 17.9MB/s]     44%|████████████████▍                    | 18.8M/42.3M [00:01<00:01, 18.4MB/s]     50%|██████████████████▎                  | 20.9M/42.3M [00:01<00:01, 18.6MB/s]     55%|████████████████████▎                | 23.2M/42.3M [00:01<00:01, 18.9MB/s]     60%|██████████████████████▏              | 25.3M/42.3M [00:02<00:00, 19.0MB/s]     65%|████████████████████████             | 27.5M/42.3M [00:02<00:00, 19.1MB/s]     70%|██████████████████████████           | 29.8M/42.3M [00:02<00:00, 19.3MB/s]     76%|███████████████████████████▉         | 32.0M/42.3M [00:02<00:00, 19.3MB/s]     81%|█████████████████████████████▉       | 34.2M/42.3M [00:02<00:00, 19.4MB/s]     86%|███████████████████████████████▉     | 36.4M/42.3M [00:02<00:00, 19.5MB/s]     91%|█████████████████████████████████▊   | 38.7M/42.3M [00:02<00:00, 19.6MB/s]     97%|███████████████████████████████████▊ | 40.9M/42.3M [00:02<00:00, 19.7MB/s]      0%|                                              | 0.00/42.3M [00:00<?, ?B/s]    100%|██████████████████████████████████████| 42.3M/42.3M [00:00<00:00, 278GB/s]
+      0%|                                              | 0.00/42.3M [00:00<?, ?B/s]      0%|                                     | 12.3k/42.3M [00:00<08:10, 86.1kB/s]      0%|                                      | 35.8k/42.3M [00:00<05:20, 132kB/s]      0%|                                       | 110k/42.3M [00:00<02:17, 306kB/s]      1%|▏                                      | 216k/42.3M [00:00<01:27, 478kB/s]      1%|▍                                      | 446k/42.3M [00:00<00:47, 884kB/s]      2%|▊                                     | 937k/42.3M [00:00<00:23, 1.74MB/s]      4%|█▋                                   | 1.89M/42.3M [00:01<00:12, 3.33MB/s]      9%|███▎                                 | 3.80M/42.3M [00:01<00:05, 6.50MB/s]     14%|█████▏                               | 5.92M/42.3M [00:01<00:03, 9.09MB/s]     19%|██████▉                              | 7.95M/42.3M [00:01<00:03, 10.6MB/s]     24%|████████▊                            | 10.0M/42.3M [00:01<00:02, 11.8MB/s]     29%|██████████▌                          | 12.1M/42.3M [00:01<00:02, 12.6MB/s]     34%|████████████▍                        | 14.2M/42.3M [00:01<00:02, 13.1MB/s]     38%|██████████████▏                      | 16.3M/42.3M [00:02<00:01, 13.6MB/s]     43%|████████████████                     | 18.3M/42.3M [00:02<00:01, 13.8MB/s]     48%|█████████████████▉                   | 20.4M/42.3M [00:02<00:01, 14.1MB/s]     53%|███████████████████▋                 | 22.5M/42.3M [00:02<00:01, 14.1MB/s]     58%|█████████████████████▌               | 24.6M/42.3M [00:02<00:01, 14.3MB/s]     63%|███████████████████████▎             | 26.7M/42.3M [00:02<00:01, 14.3MB/s]     68%|█████████████████████████▏           | 28.8M/42.3M [00:02<00:00, 14.4MB/s]     73%|██████████████████████████▉          | 30.8M/42.3M [00:03<00:00, 14.4MB/s]     78%|████████████████████████████▊        | 32.9M/42.3M [00:03<00:00, 14.4MB/s]     83%|██████████████████████████████▌      | 35.0M/42.3M [00:03<00:00, 14.3MB/s]     88%|████████████████████████████████▍    | 37.0M/42.3M [00:03<00:00, 14.3MB/s]     93%|██████████████████████████████████▏  | 39.1M/42.3M [00:03<00:00, 14.4MB/s]     97%|████████████████████████████████████ | 41.2M/42.3M [00:03<00:00, 14.4MB/s]      0%|                                              | 0.00/42.3M [00:00<?, ?B/s]    100%|██████████████████████████████████████| 42.3M/42.3M [00:00<00:00, 238GB/s]
 
 
 
@@ -68,7 +68,7 @@ png file.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 9.033 seconds)
+   **Total running time of the script:** (0 minutes 10.015 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_EELS_curve_fitting.py:

diff --git a/_sources/auto_examples/model_fitting/plot_residual.rst.txt b/_sources/auto_examples/model_fitting/plot_residual.rst.txt
@@ -110,15 +110,15 @@ Fit for all navigation positions:
 
  .. code-block:: none
 
-    Exception ignored in: <function tqdm.__del__ at 0x7f43efe82840>
+    Exception ignored in: <function tqdm.__del__ at 0x7fc2e07aa840>
     Traceback (most recent call last):
       File "/opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/tqdm/std.py", line 1148, in __del__
         self.close()
       File "/opt/hostedtoolcache/Python/3.11.8/x64/lib/python3.11/site-packages/tqdm/notebook.py", line 279, in close
         self.disp(bar_style='danger', check_delay=False)
         ^^^^^^^^^
     AttributeError: 'tqdm_notebook' object has no attribute 'disp'
-      0%|          | 0/10 [00:00<?, ?it/s]    100%|██████████| 10/10 [00:00<00:00, 1424.26it/s]
+      0%|          | 0/10 [00:00<?, ?it/s]    100%|██████████| 10/10 [00:00<00:00, 1195.81it/s]
 
 
 
@@ -164,7 +164,7 @@ sphinx_gallery_thumbnail_number = 2
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.598 seconds)
+   **Total running time of the script:** (0 minutes 0.532 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_plot_residual.py:

diff --git a/_sources/auto_examples/model_fitting/sg_execution_times.rst.txt b/_sources/auto_examples/model_fitting/sg_execution_times.rst.txt
@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:09.993** total execution time for 3 files **from auto_examples/model_fitting**:
+**00:10.918** total execution time for 3 files **from auto_examples/model_fitting**:
 
 .. container::
 
@@ -33,11 +33,11 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_auto_examples_model_fitting_EELS_curve_fitting.py` (``EELS_curve_fitting.py``)
-     - 00:09.033
+     - 00:10.015
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_plot_residual.py` (``plot_residual.py``)
-     - 00:00.598
+     - 00:00.532
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_simple_arctan_fit.py` (``simple_arctan_fit.py``)
-     - 00:00.362
+     - 00:00.372
      - 0.0
diff --git a/_sources/auto_examples/model_fitting/simple_arctan_fit.rst.txt b/_sources/auto_examples/model_fitting/simple_arctan_fit.rst.txt
@@ -42,9 +42,9 @@ Fit an arctan function.
     Active: True
     Parameter Name |    Free |      Value |        Std |        Min |        Max | Linear
     ============== | ======= | ========== | ========== | ========== | ========== | ======
-                 A |    True | 1.00157171 | 0.00212899 |       None |       None |   True
-                 k |    True | 1.01792870 | 0.08682222 |       None |       None |  False
-                x0 |    True | 0.03878109 | 0.07831814 |       None |       None |  False
+                 A |    True | 1.00047784 | 0.00204201 |       None |       None |   True
+                 k |    True | 1.11203554 | 0.09575265 |       None |       None |  False
+                x0 |    True | -0.0523038 | 0.07160969 |       None |       None |  False
 
 
 
@@ -91,7 +91,7 @@ Fit an arctan function.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.362 seconds)
+   **Total running time of the script:** (0 minutes 0.372 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_simple_arctan_fit.py:

diff --git a/_sources/sg_execution_times.rst.txt b/_sources/sg_execution_times.rst.txt
@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:09.993** total execution time for 3 files **from all galleries**:
+**00:10.918** total execution time for 3 files **from all galleries**:
 
 .. container::
 
@@ -33,11 +33,11 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_auto_examples_model_fitting_EELS_curve_fitting.py` (``../examples/model_fitting/EELS_curve_fitting.py``)
-     - 00:09.033
+     - 00:10.015
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_plot_residual.py` (``../examples/model_fitting/plot_residual.py``)
-     - 00:00.598
+     - 00:00.532
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_simple_arctan_fit.py` (``../examples/model_fitting/simple_arctan_fit.py``)
-     - 00:00.362
+     - 00:00.372
      - 0.0
diff --git a/auto_examples/model_fitting/EELS_curve_fitting.html b/auto_examples/model_fitting/EELS_curve_fitting.html
@@ -471,33 +471,34 @@
 <p>Performs curve fitting to an EELS spectrum, plots the result and saves it as
 png file.</p>
 <img src="../../_images/sphx_glr_EELS_curve_fitting_001.png" srcset="../../_images/sphx_glr_EELS_curve_fitting_001.png" alt="coreloss_spectrum Signal" class = "sphx-glr-single-img"/><div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>  0%|                                              | 0.00/42.3M [00:00&lt;?, ?B/s]
-  0%|                                      | 12.3k/42.3M [00:00&lt;06:26, 109kB/s]
-  0%|                                      | 44.0k/42.3M [00:00&lt;03:20, 211kB/s]
-  0%|                                      | 90.1k/42.3M [00:00&lt;02:20, 301kB/s]
-  0%|▏                                      | 203k/42.3M [00:00&lt;01:13, 575kB/s]
-  1%|▎                                     | 414k/42.3M [00:00&lt;00:40, 1.04MB/s]
-  2%|▊                                     | 855k/42.3M [00:00&lt;00:20, 2.01MB/s]
-  4%|█▌                                   | 1.76M/42.3M [00:00&lt;00:10, 3.96MB/s]
-  8%|███                                  | 3.54M/42.3M [00:00&lt;00:05, 7.71MB/s]
- 14%|█████                                | 5.78M/42.3M [00:01&lt;00:03, 11.5MB/s]
- 19%|██████▉                              | 7.86M/42.3M [00:01&lt;00:02, 13.6MB/s]
- 24%|████████▊                            | 10.1M/42.3M [00:01&lt;00:02, 15.4MB/s]
- 29%|██████████▋                          | 12.2M/42.3M [00:01&lt;00:01, 16.5MB/s]
- 34%|████████████▋                        | 14.4M/42.3M [00:01&lt;00:01, 17.4MB/s]
- 39%|██████████████▌                      | 16.6M/42.3M [00:01&lt;00:01, 17.9MB/s]
- 44%|████████████████▍                    | 18.8M/42.3M [00:01&lt;00:01, 18.4MB/s]
- 50%|██████████████████▎                  | 20.9M/42.3M [00:01&lt;00:01, 18.6MB/s]
- 55%|████████████████████▎                | 23.2M/42.3M [00:01&lt;00:01, 18.9MB/s]
- 60%|██████████████████████▏              | 25.3M/42.3M [00:02&lt;00:00, 19.0MB/s]
- 65%|████████████████████████             | 27.5M/42.3M [00:02&lt;00:00, 19.1MB/s]
- 70%|██████████████████████████           | 29.8M/42.3M [00:02&lt;00:00, 19.3MB/s]
- 76%|███████████████████████████▉         | 32.0M/42.3M [00:02&lt;00:00, 19.3MB/s]
- 81%|█████████████████████████████▉       | 34.2M/42.3M [00:02&lt;00:00, 19.4MB/s]
- 86%|███████████████████████████████▉     | 36.4M/42.3M [00:02&lt;00:00, 19.5MB/s]
- 91%|█████████████████████████████████▊   | 38.7M/42.3M [00:02&lt;00:00, 19.6MB/s]
- 97%|███████████████████████████████████▊ | 40.9M/42.3M [00:02&lt;00:00, 19.7MB/s]
+  0%|                                     | 12.3k/42.3M [00:00&lt;08:10, 86.1kB/s]
+  0%|                                      | 35.8k/42.3M [00:00&lt;05:20, 132kB/s]
+  0%|                                       | 110k/42.3M [00:00&lt;02:17, 306kB/s]
+  1%|▏                                      | 216k/42.3M [00:00&lt;01:27, 478kB/s]
+  1%|▍                                      | 446k/42.3M [00:00&lt;00:47, 884kB/s]
+  2%|▊                                     | 937k/42.3M [00:00&lt;00:23, 1.74MB/s]
+  4%|█▋                                   | 1.89M/42.3M [00:01&lt;00:12, 3.33MB/s]
+  9%|███▎                                 | 3.80M/42.3M [00:01&lt;00:05, 6.50MB/s]
+ 14%|█████▏                               | 5.92M/42.3M [00:01&lt;00:03, 9.09MB/s]
+ 19%|██████▉                              | 7.95M/42.3M [00:01&lt;00:03, 10.6MB/s]
+ 24%|████████▊                            | 10.0M/42.3M [00:01&lt;00:02, 11.8MB/s]
+ 29%|██████████▌                          | 12.1M/42.3M [00:01&lt;00:02, 12.6MB/s]
+ 34%|████████████▍                        | 14.2M/42.3M [00:01&lt;00:02, 13.1MB/s]
+ 38%|██████████████▏                      | 16.3M/42.3M [00:02&lt;00:01, 13.6MB/s]
+ 43%|████████████████                     | 18.3M/42.3M [00:02&lt;00:01, 13.8MB/s]
+ 48%|█████████████████▉                   | 20.4M/42.3M [00:02&lt;00:01, 14.1MB/s]
+ 53%|███████████████████▋                 | 22.5M/42.3M [00:02&lt;00:01, 14.1MB/s]
+ 58%|█████████████████████▌               | 24.6M/42.3M [00:02&lt;00:01, 14.3MB/s]
+ 63%|███████████████████████▎             | 26.7M/42.3M [00:02&lt;00:01, 14.3MB/s]
+ 68%|█████████████████████████▏           | 28.8M/42.3M [00:02&lt;00:00, 14.4MB/s]
+ 73%|██████████████████████████▉          | 30.8M/42.3M [00:03&lt;00:00, 14.4MB/s]
+ 78%|████████████████████████████▊        | 32.9M/42.3M [00:03&lt;00:00, 14.4MB/s]
+ 83%|██████████████████████████████▌      | 35.0M/42.3M [00:03&lt;00:00, 14.3MB/s]
+ 88%|████████████████████████████████▍    | 37.0M/42.3M [00:03&lt;00:00, 14.3MB/s]
+ 93%|██████████████████████████████████▏  | 39.1M/42.3M [00:03&lt;00:00, 14.4MB/s]
+ 97%|████████████████████████████████████ | 41.2M/42.3M [00:03&lt;00:00, 14.4MB/s]
   0%|                                              | 0.00/42.3M [00:00&lt;?, ?B/s]
-100%|██████████████████████████████████████| 42.3M/42.3M [00:00&lt;00:00, 278GB/s]
+100%|██████████████████████████████████████| 42.3M/42.3M [00:00&lt;00:00, 238GB/s]
 </pre></div>
 </div>
 <div class="line-block">
@@ -519,7 +520,7 @@
 <a href="https://hyperspy.org/hyperspy-doc/dev/reference/base_classes/model/model1d.html#hyperspy.models.model1d.Model1D.plot" title="hyperspy.models.model1d.Model1D.plot" class="sphx-glr-backref-module-hyperspy-models-model1d sphx-glr-backref-type-py-method"><span class="n">m</span><span class="o">.</span><span class="n">plot</span></a><span class="p">()</span>
 </pre></div>
 </div>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 9.033 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 10.015 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-model-fitting-eels-curve-fitting-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../../_downloads/037b5aa4752b41748abf69bba9d1cbe4/EELS_curve_fitting.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">EELS_curve_fitting.ipynb</span></code></a></p>