Update docs build

.buildinfo

@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: f0d32603edd0d3c82c439b0a15b33533
+config: 5dc3cbe299fe605faf02ff19d5bc1c37
 tags: 645f666f9bcd5a90fca523b33c5a78b7

_sources/auto_examples/model_fitting/plot_residual.rst.txt

@@ -110,15 +110,15 @@ Fit for all navigation positions:
 
  .. code-block:: none
 
-    Exception ignored in: <function tqdm.__del__ at 0x7f5eca0059e0>
+    Exception ignored in: <function tqdm.__del__ at 0x7f338d3b99e0>
     Traceback (most recent call last):
       File "/opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/tqdm/std.py", line 1148, in __del__
         self.close()
       File "/opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/tqdm/notebook.py", line 279, in close
         self.disp(bar_style='danger', check_delay=False)
         ^^^^^^^^^
     AttributeError: 'tqdm_notebook' object has no attribute 'disp'
-      0%|          | 0/10 [00:00<?, ?it/s]    100%|██████████| 10/10 [00:00<00:00, 1478.59it/s]
+      0%|          | 0/10 [00:00<?, ?it/s]    100%|██████████| 10/10 [00:00<00:00, 1454.54it/s]
 
 
 
@@ -164,7 +164,7 @@ sphinx_gallery_thumbnail_number = 2
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.553 seconds)
+   **Total running time of the script:** (0 minutes 0.562 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_plot_residual.py:

_sources/auto_examples/model_fitting/sg_execution_times.rst.txt

@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:34.450** total execution time for 3 files **from auto_examples/model_fitting**:
+**00:09.148** total execution time for 3 files **from auto_examples/model_fitting**:
 
 .. container::
 
@@ -33,11 +33,11 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_auto_examples_model_fitting_EELS_curve_fitting.py` (``EELS_curve_fitting.py``)
-     - 00:33.528
+     - 00:08.262
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_plot_residual.py` (``plot_residual.py``)
-     - 00:00.553
+     - 00:00.562
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_simple_arctan_fit.py` (``simple_arctan_fit.py``)
-     - 00:00.369
+     - 00:00.323
      - 0.0

_sources/auto_examples/model_fitting/simple_arctan_fit.rst.txt

@@ -42,9 +42,9 @@ Fit an arctan function.
     Active: True
     Parameter Name |    Free |      Value |        Std |        Min |        Max | Linear
     ============== | ======= | ========== | ========== | ========== | ========== | ======
-                 A |    True | 1.00230153 | 0.00213288 |       None |       None |   True
-                 k |    True | 1.16860784 | 0.10809514 |       None |       None |  False
-                x0 |    True | 0.02252986 | 0.07242428 |       None |       None |  False
+                 A |    True | 1.00025977 | 0.00213855 |       None |       None |   True
+                 k |    True | 0.97361073 | 0.08147353 |       None |       None |  False
+                x0 |    True | 0.05768355 | 0.08070912 |       None |       None |  False
 
 
 
@@ -91,7 +91,7 @@ Fit an arctan function.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.369 seconds)
+   **Total running time of the script:** (0 minutes 0.323 seconds)
 
 
 .. _sphx_glr_download_auto_examples_model_fitting_simple_arctan_fit.py:

_sources/sg_execution_times.rst.txt

@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**00:34.450** total execution time for 3 files **from all galleries**:
+**00:09.148** total execution time for 3 files **from all galleries**:
 
 .. container::
 
@@ -33,11 +33,11 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_auto_examples_model_fitting_EELS_curve_fitting.py` (``../examples/model_fitting/EELS_curve_fitting.py``)
-     - 00:33.528
+     - 00:08.262
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_plot_residual.py` (``../examples/model_fitting/plot_residual.py``)
-     - 00:00.553
+     - 00:00.562
      - 0.0
    * - :ref:`sphx_glr_auto_examples_model_fitting_simple_arctan_fit.py` (``../examples/model_fitting/simple_arctan_fit.py``)
-     - 00:00.369
+     - 00:00.323
      - 0.0

auto_examples/model_fitting/plot_residual.html

@@ -478,7 +478,7 @@
 <div class="highlight-Python notranslate"><div class="highlight"><pre><span></span><a href="https://hyperspy.org/hyperspy-doc/dev/reference/base_classes/model/basemodel.html#hyperspy.model.BaseModel.multifit" title="hyperspy.model.BaseModel.multifit" class="sphx-glr-backref-module-hyperspy-model sphx-glr-backref-type-py-method"><span class="n">m</span><span class="o">.</span><span class="n">multifit</span></a><span class="p">()</span>
 </pre></div>
 </div>
-<div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>Exception ignored in: &lt;function tqdm.__del__ at 0x7f5eca0059e0&gt;
+<div class="sphx-glr-script-out highlight-none notranslate"><div class="highlight"><pre><span></span>Exception ignored in: &lt;function tqdm.__del__ at 0x7f338d3b99e0&gt;
 Traceback (most recent call last):
   File &quot;/opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/tqdm/std.py&quot;, line 1148, in __del__
     self.close()
@@ -488,7 +488,7 @@
 AttributeError: &#39;tqdm_notebook&#39; object has no attribute &#39;disp&#39;
 
   0%|          | 0/10 [00:00&lt;?, ?it/s]
-100%|██████████| 10/10 [00:00&lt;00:00, 1478.59it/s]
+100%|██████████| 10/10 [00:00&lt;00:00, 1454.54it/s]
 </pre></div>
 </div>
 <p>Plot the fitted model with residual:</p>
@@ -500,7 +500,7 @@
 <li><img src="../../_images/sphx_glr_plot_residual_002.png" srcset="../../_images/sphx_glr_plot_residual_002.png" alt="Signal" class = "sphx-glr-multi-img"/></li>
 </ul>
 <p>sphinx_gallery_thumbnail_number = 2</p>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.553 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.562 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-model-fitting-plot-residual-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../../_downloads/971c2906ad663020c2e6701928a24c9a/plot_residual.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">plot_residual.ipynb</span></code></a></p>

auto_examples/model_fitting/sg_execution_times.html

@@ -426,7 +426,7 @@
 
   <section id="computation-times">
 <span id="sphx-glr-auto-examples-model-fitting-sg-execution-times"></span><h1>Computation times<a class="headerlink" href="#computation-times" title="Link to this heading">#</a></h1>
-<p><strong>00:34.450</strong> total execution time for 3 files <strong>from auto_examples/model_fitting</strong>:</p>
+<p><strong>00:09.148</strong> total execution time for 3 files <strong>from auto_examples/model_fitting</strong>:</p>
 <div class="docutils container">
 <style scoped>
 <link href="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/5.3.0/css/bootstrap.min.css" rel="stylesheet" />
@@ -448,15 +448,15 @@
 </thead>
 <tbody>
 <tr class="row-even"><td><p><a class="reference internal" href="EELS_curve_fitting.html#sphx-glr-auto-examples-model-fitting-eels-curve-fitting-py"><span class="std std-ref">EELS curve fitting</span></a> (<code class="docutils literal notranslate"><span class="pre">EELS_curve_fitting.py</span></code>)</p></td>
-<td><p>00:33.528</p></td>
+<td><p>00:08.262</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-odd"><td><p><a class="reference internal" href="plot_residual.html#sphx-glr-auto-examples-model-fitting-plot-residual-py"><span class="std std-ref">Plot Residual</span></a> (<code class="docutils literal notranslate"><span class="pre">plot_residual.py</span></code>)</p></td>
-<td><p>00:00.553</p></td>
+<td><p>00:00.562</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="simple_arctan_fit.html#sphx-glr-auto-examples-model-fitting-simple-arctan-fit-py"><span class="std std-ref">Simple arctan fit</span></a> (<code class="docutils literal notranslate"><span class="pre">simple_arctan_fit.py</span></code>)</p></td>
-<td><p>00:00.369</p></td>
+<td><p>00:00.323</p></td>
 <td><p>0.0</p></td>
 </tr>
 </tbody>

auto_examples/model_fitting/simple_arctan_fit.html

@@ -460,9 +460,9 @@
 Active: True
 Parameter Name |    Free |      Value |        Std |        Min |        Max | Linear
 ============== | ======= | ========== | ========== | ========== | ========== | ======
-             A |    True | 1.00230153 | 0.00213288 |       None |       None |   True
-             k |    True | 1.16860784 | 0.10809514 |       None |       None |  False
-            x0 |    True | 0.02252986 | 0.07242428 |       None |       None |  False
+             A |    True | 1.00025977 | 0.00213855 |       None |       None |   True
+             k |    True | 0.97361073 | 0.08147353 |       None |       None |  False
+            x0 |    True | 0.05768355 | 0.08070912 |       None |       None |  False
 </pre></div>
 </div>
 <div class="line-block">
@@ -499,7 +499,7 @@
 <a href="https://hyperspy.org/hyperspy-doc/dev/reference/base_classes/model/model1d.html#hyperspy.models.model1d.Model1D.plot" title="hyperspy.models.model1d.Model1D.plot" class="sphx-glr-backref-module-hyperspy-models-model1d sphx-glr-backref-type-py-method"><span class="n">m</span><span class="o">.</span><span class="n">plot</span></a><span class="p">()</span>
 </pre></div>
 </div>
-<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.369 seconds)</p>
+<p class="sphx-glr-timing"><strong>Total running time of the script:</strong> (0 minutes 0.323 seconds)</p>
 <div class="sphx-glr-footer sphx-glr-footer-example docutils container" id="sphx-glr-download-auto-examples-model-fitting-simple-arctan-fit-py">
 <div class="sphx-glr-download sphx-glr-download-jupyter docutils container">
 <p><a class="reference download internal" download="" href="../../_downloads/9fccdf8a75923677d25708442159bb9b/simple_arctan_fit.ipynb"><code class="xref download docutils literal notranslate"><span class="pre">Download</span> <span class="pre">Jupyter</span> <span class="pre">notebook:</span> <span class="pre">simple_arctan_fit.ipynb</span></code></a></p>

changes.html

@@ -449,6 +449,7 @@ <h3>Bug Fixes<a class="headerlink" href="#bug-fixes" title="Link to this heading
 <h3>Improved Documentation<a class="headerlink" href="#improved-documentation" title="Link to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Add eXSpy logo and adapt spelling to capital X (<a class="reference external" href="https://github.com/hyperspy/exspy/issues/22">#22</a>)</p></li>
+<li><p>Fix DOI and add more badges to readme file. (<a class="reference external" href="https://github.com/hyperspy/exspy/issues/38">#38</a>)</p></li>
 </ul>
 </section>
 <section id="maintenance">
@@ -459,8 +460,8 @@ <h3>Maintenance<a class="headerlink" href="#maintenance" title="Link to this hea
 </ul>
 </section>
 </section>
-<section id="id5">
-<h2>0.1 (2023-12-03)<a class="headerlink" href="#id5" title="Link to this heading">#</a></h2>
+<section id="id6">
+<h2>0.1 (2023-12-03)<a class="headerlink" href="#id6" title="Link to this heading">#</a></h2>
 <section id="new-features">
 <h3>New features<a class="headerlink" href="#new-features" title="Link to this heading">#</a></h3>
 <ul class="simple">
@@ -477,8 +478,8 @@ <h3>Enhancements<a class="headerlink" href="#enhancements" title="Link to this h
 <li><p>Enable <code class="docutils literal notranslate"><span class="pre">signal_range</span></code> arguments when using <code class="docutils literal notranslate"><span class="pre">subpixel=True</span></code> in <a class="reference internal" href="reference/signals.html#exspy.signals.EELSSpectrum.align_zero_loss_peak" title="exspy.signals.EELSSpectrum.align_zero_loss_peak"><code class="xref py py-meth docutils literal notranslate"><span class="pre">align_zero_loss_peak()</span></code></a> (<a class="reference external" href="https://github.com/hyperspy/exspy/pull/7">#7</a>)</p></li>
 </ul>
 </section>
-<section id="id7">
-<h3>Maintenance<a class="headerlink" href="#id7" title="Link to this heading">#</a></h3>
+<section id="id8">
+<h3>Maintenance<a class="headerlink" href="#id8" title="Link to this heading">#</a></h3>
 <ul class="simple">
 <li><p>Use towncrier to manage release notes and improve setting dev version (<a class="reference external" href="https://github.com/hyperspy/exspy/issues/14">#14</a>)</p></li>
 <li><p>Use reusable workflow from the hyperspy organisation for the doc workflow (<a class="reference external" href="https://github.com/hyperspy/exspy/pull/13">#13</a>)</p></li>
@@ -553,10 +554,10 @@ <h2>Initiation (2023-10-28)<a class="headerlink" href="#initiation-2023-10-28" t
 <li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#maintenance">Maintenance</a></li>
 </ul>
 </li>
-<li class="toc-h2 nav-item toc-entry"><a class="reference internal nav-link" href="#id5">0.1 (2023-12-03)</a><ul class="visible nav section-nav flex-column">
+<li class="toc-h2 nav-item toc-entry"><a class="reference internal nav-link" href="#id6">0.1 (2023-12-03)</a><ul class="visible nav section-nav flex-column">
 <li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#new-features">New features</a></li>
 <li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#enhancements">Enhancements</a></li>
-<li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#id7">Maintenance</a></li>
+<li class="toc-h3 nav-item toc-entry"><a class="reference internal nav-link" href="#id8">Maintenance</a></li>
 </ul>
 </li>
 <li class="toc-h2 nav-item toc-entry"><a class="reference internal nav-link" href="#initiation-2023-10-28">Initiation (2023-10-28)</a></li>

sg_execution_times.html

@@ -426,7 +426,7 @@
 
   <section id="computation-times">
 <span id="sphx-glr-sg-execution-times"></span><h1>Computation times<a class="headerlink" href="#computation-times" title="Link to this heading">#</a></h1>
-<p><strong>00:34.450</strong> total execution time for 3 files <strong>from all galleries</strong>:</p>
+<p><strong>00:09.148</strong> total execution time for 3 files <strong>from all galleries</strong>:</p>
 <div class="docutils container">
 <style scoped>
 <link href="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/5.3.0/css/bootstrap.min.css" rel="stylesheet" />
@@ -448,15 +448,15 @@
 </thead>
 <tbody>
 <tr class="row-even"><td><p><a class="reference internal" href="auto_examples/model_fitting/EELS_curve_fitting.html#sphx-glr-auto-examples-model-fitting-eels-curve-fitting-py"><span class="std std-ref">EELS curve fitting</span></a> (<code class="docutils literal notranslate"><span class="pre">../examples/model_fitting/EELS_curve_fitting.py</span></code>)</p></td>
-<td><p>00:33.528</p></td>
+<td><p>00:08.262</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-odd"><td><p><a class="reference internal" href="auto_examples/model_fitting/plot_residual.html#sphx-glr-auto-examples-model-fitting-plot-residual-py"><span class="std std-ref">Plot Residual</span></a> (<code class="docutils literal notranslate"><span class="pre">../examples/model_fitting/plot_residual.py</span></code>)</p></td>
-<td><p>00:00.553</p></td>
+<td><p>00:00.562</p></td>
 <td><p>0.0</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="auto_examples/model_fitting/simple_arctan_fit.html#sphx-glr-auto-examples-model-fitting-simple-arctan-fit-py"><span class="std std-ref">Simple arctan fit</span></a> (<code class="docutils literal notranslate"><span class="pre">../examples/model_fitting/simple_arctan_fit.py</span></code>)</p></td>
-<td><p>00:00.369</p></td>
+<td><p>00:00.323</p></td>
 <td><p>0.0</p></td>
 </tr>
 </tbody>