Change_internal_structure #384
Workflow file for this run
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| # This is a basic workflow to help you get started with Actions | |
| name: CI | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the master branch | |
| pull_request: | |
| branches: [main] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # # Run tests every month | |
| # schedule: | |
| # - cron: '0 0 1 * *' | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "build" | |
| linux: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| include: | |
| - name: "Ubuntu OpenMPI g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "ubuntu_gcc_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| # ASAN_OPTIONS: "ASAN_OPTIONS=detect_leaks=0" # issue probably with openmpi | |
| CMAKE_BUILD_TYPE: Debug | |
| CODE_COVERAGE: "OFF" | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| - name: "Ubuntu OpenMPI clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "ubuntu_clang_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| CMAKE_BUILD_TYPE: Debug | |
| CODE_COVERAGE: "OFF" | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| - name: "Ubuntu MPICH g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "ubuntu_gcc_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| USE_SANITIZER: "Address" | |
| ASAN_OPTIONS: "" | |
| CMAKE_BUILD_TYPE: Debug | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "ON" | |
| - name: "Ubuntu MPICH clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "ubuntu_clang_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| USE_SANITIZER: "Address" | |
| ASAN_OPTIONS: "" | |
| CMAKE_BUILD_TYPE: Debug | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "OFF" | |
| # Hangs up on github | |
| - name: "Debian OpenMPI g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "debian_gcc_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| # ASAN_OPTIONS: "ASAN_OPTIONS=detect_leaks=0" # issue probably with openmpi | |
| CMAKE_BUILD_TYPE: Debug | |
| CODE_COVERAGE: "OFF" | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| - name: "Debian OpenMPI clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "debian_clang_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| CMAKE_BUILD_TYPE: Debug | |
| CODE_COVERAGE: "OFF" | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| - name: "Debian MPICH g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "debian_gcc_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| USE_SANITIZER: "Address" | |
| ASAN_OPTIONS: "" | |
| CMAKE_BUILD_TYPE: Debug | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "OFF" | |
| - name: "Debian MPICH clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "debian_clang_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| USE_SANITIZER: "Address" | |
| ASAN_OPTIONS: "" | |
| CMAKE_BUILD_TYPE: Debug | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "OFF" | |
| container: | |
| image: pierremarchand/htool_testing_environments:${{ matrix.container }} | |
| options: --user root ${{ matrix.DOCKER_OPTIONS }} | |
| env: | |
| OMPI_CC: ${{ matrix.CC_COMPILER }} | |
| OMPI_CXX: ${{ matrix.CXX_COMPILER }} | |
| CC: ${{ matrix.CC_COMPILER }} | |
| CXX: ${{ matrix.CXX_COMPILER }} | |
| name: CI (${{ matrix.name }}) | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| - name: Checkout htool | |
| uses: actions/checkout@v3 | |
| with: | |
| path: "htool" | |
| # ref: 14d013835eceb940b9b51dd90462fe67834db777 | |
| fetch-depth: 0 # to get tags | |
| - name: Checkout hpddm | |
| run: | | |
| git clone https://github.com/hpddm/hpddm.git hpddm | |
| cd hpddm && git checkout 5890d5addf3962d539dc25c441ec3ff4af93b3ab | |
| # uses: actions/checkout@v3 | |
| # with: | |
| # path: "hpddm" | |
| # repository: hpddm/hpddm | |
| # ref: afb9562c9c6673d9ff760985b104ef8d4caa3621 | |
| - name: Activate virtualenv | |
| run: | | |
| . /usr/local/share/venv/bin/activate | |
| echo PATH=$PATH >> $GITHUB_ENV | |
| - name: Build tests | |
| run: | | |
| cd htool && mkdir build && cd build | |
| cmake -DHTOOL_WITH_EXAMPLES=ON -DHTOOL_WITH_DOC=ON -DHTOOL_WITH_STRICT_TESTS=ON -DMPIEXEC_PREFLAGS="${{ matrix.MPIEXEC_PREFLAGS }}" -DUSE_SANITIZER=${{ matrix.USE_SANITIZER }} -DCMAKE_BUILD_TYPE=${{ matrix.CMAKE_BUILD_TYPE }} -DCODE_COVERAGE=${{ matrix.CODE_COVERAGE }} ../ | |
| make -j 4 build-tests | |
| - name: Run tests | |
| run: | | |
| cd htool/build | |
| export OMP_NUM_THREADS=2 | |
| ${{ matrix.ASAN_OPTIONS }} ctest -j 4 --output-on-failure | |
| - name: Build examples | |
| run: | | |
| cd htool/build | |
| make -j 4 build-examples | |
| - name: Build documentation | |
| run: | | |
| cd htool/build | |
| make doc | |
| - name: Check c++ format | |
| uses: DoozyX/[email protected] | |
| with: | |
| source: 'htool/include htool/tests' | |
| # exclude: './third_party ./external' | |
| extensions: 'hpp,cpp' | |
| clangFormatVersion: 16 | |
| style: file | |
| - name: Check cmake format | |
| run: | | |
| . /usr/local/share/venv/bin/activate | |
| cd htool/build | |
| make cmake-format | |
| git diff --exit-code | |
| - name: Generate coverage reports | |
| if: matrix.CODE_COVERAGE == 'ON' | |
| run: | | |
| cd htool/ | |
| lcov --capture --base-directory ./ --directory build/ --output-file coverage.info | |
| lcov --remove coverage.info '/usr/*' '*/hpddm/*' --output-file coverage.info | |
| apt-get update | |
| apt-get install -y --no-install-recommends gpg gpg-agent | |
| - name: Upload coverage to Codecov | |
| if: matrix.CODE_COVERAGE == 'ON' | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| fail_ci_if_error: true | |
| files: htool/coverage.info | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| verbose: true |