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The code to analyze the diffusion MRI data to identify the vertical occipital fascicles

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A major human white-matter pathway between dorsal and ventral visual cortex

This repository contains the source code to replicate key results from the following paper paper:

A major human white-matter pathway between dorsal and ventral visual cortex. by Takemura, H., Rokem, A., Winawer, J., Yeatman, J. D., Wandell, B. A. & Pestilli, F. Cerebral Cortex, 26(5), 2205-2214.

Required operating enviroment

Matlab 2012b. The code probably runs on earlier versions, but we have not checked extensively.

The code also requires three toolboxes you can download freely:

  1. vistasoft (Wandell Lab., Stanford) https://github.com/vistalab/vistasoft

  2. LIFE (Franco Pestilli, Indiana University) https://github.com/francopestilli/life

  3. MBA (Franco Pestilli, Indiana University) https://github.com/francopestilli/mba

  4. AFQ (Jason D. Yeatman, Stanford) https://github.com/jyeatman/AFQ

All of this software must be on your path.

If you use this software please cite the article above.

Copyright (c) Hiromasa Takemura, Stanford VISTA Team, 2013

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The code to analyze the diffusion MRI data to identify the vertical occipital fascicles

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