Update Modules [15 October 2024, 15:43]

hpcugentbot · Oct 15, 2024 · cbed114 · cbed114
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diff --git a/mkdocs/docs/HPC/only/gent/available_software/data/json_data.json b/mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
diff --git a/mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json b/mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/AlphaFold.md b/mkdocs/docs/HPC/only/gent/available_software/detail/AlphaFold.md
@@ -24,7 +24,7 @@ module load AlphaFold/2.3.4-foss-2022a-ColabFold
 |AlphaFold/2.3.4-foss-2022a-ColabFold|-|-|x|-|x|-|-|
 |AlphaFold/2.3.4-foss-2022a-CUDA-11.7.0-ColabFold|x|-|x|-|x|-|-|
 |AlphaFold/2.3.2-foss-2023a-CUDA-12.1.1|x|-|x|-|x|-|-|
-|AlphaFold/2.3.2-foss-2023a|-|x|-|x|-|x|x|
+|AlphaFold/2.3.2-foss-2023a|x|x|x|x|-|x|x|
 |AlphaFold/2.3.1-foss-2022a-CUDA-11.7.0|x|-|-|-|x|-|-|
 |AlphaFold/2.3.1-foss-2022a|x|x|x|x|x|-|-|
 |AlphaFold/2.3.0-foss-2021b-CUDA-11.4.1|x|-|-|-|x|-|-|

diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/KMCLib.md b/mkdocs/docs/HPC/only/gent/available_software/detail/KMCLib.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+KMCLib
+======
+
+# Available modules
+
+
+The overview below shows which KMCLib installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using KMCLib, load one of these modules using a `module load` command like:
+
+```shell
+module load KMCLib/2.0-a2-foss-2023a-Python-2.7.18
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*  
+
+| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|KMCLib/2.0-a2-foss-2023a-Python-2.7.18|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/NextDenovo.md b/mkdocs/docs/HPC/only/gent/available_software/detail/NextDenovo.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+NextDenovo
+==========
+
+# Available modules
+
+
+The overview below shows which NextDenovo installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using NextDenovo, load one of these modules using a `module load` command like:
+
+```shell
+module load NextDenovo/2.5.2-20240510-GCCcore-12.3.0
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*  
+
+| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|NextDenovo/2.5.2-20240510-GCCcore-12.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Optax.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Optax.md
@@ -22,5 +22,5 @@ module load Optax/0.2.2-gfbf-2023a-CUDA-12.1.1
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
 |Optax/0.2.2-gfbf-2023a-CUDA-12.1.1|x|-|x|-|x|-|-|
-|Optax/0.2.2-gfbf-2023a|-|x|-|x|-|x|x|
+|Optax/0.2.2-gfbf-2023a|x|x|x|x|-|x|x|
 |Optax/0.2.2-foss-2023a|x|x|x|x|x|x|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Stellarscope.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Stellarscope.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+Stellarscope
+============
+
+# Available modules
+
+
+The overview below shows which Stellarscope installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using Stellarscope, load one of these modules using a `module load` command like:
+
+```shell
+module load Stellarscope/1.4.1-foss-2023a
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*  
+
+| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|Stellarscope/1.4.1-foss-2023a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/dm-haiku.md b/mkdocs/docs/HPC/only/gent/available_software/detail/dm-haiku.md
@@ -22,6 +22,6 @@ module load dm-haiku/0.0.12-foss-2023a-CUDA-12.1.1
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
 |dm-haiku/0.0.12-foss-2023a-CUDA-12.1.1|x|-|x|-|x|-|-|
-|dm-haiku/0.0.12-foss-2023a|-|x|-|x|-|x|x|
+|dm-haiku/0.0.12-foss-2023a|x|x|x|x|-|x|x|
 |dm-haiku/0.0.9-foss-2022a-CUDA-11.7.0|-|-|x|-|x|-|-|
 |dm-haiku/0.0.9-foss-2021a-CUDA-11.3.1|x|-|-|-|x|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/jax.md b/mkdocs/docs/HPC/only/gent/available_software/detail/jax.md
@@ -22,7 +22,7 @@ module load jax/0.4.25-gfbf-2023a-CUDA-12.1.1
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
 |jax/0.4.25-gfbf-2023a-CUDA-12.1.1|x|-|x|-|x|-|-|
-|jax/0.4.25-gfbf-2023a|-|x|-|x|-|x|x|
+|jax/0.4.25-gfbf-2023a|x|x|x|x|-|x|x|
 |jax/0.4.25-foss-2023a|x|x|x|x|x|x|x|
 |jax/0.3.25-foss-2022a-CUDA-11.7.0|x|-|x|-|x|-|-|
 |jax/0.3.25-foss-2022a|x|x|x|x|x|x|-|

diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/numpy.md b/mkdocs/docs/HPC/only/gent/available_software/detail/numpy.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+numpy
+=====
+
+# Available modules
+
+
+The overview below shows which numpy installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using numpy, load one of these modules using a `module load` command like:
+
+```shell
+module load numpy/1.16.6-foss-2023a-Python-2.7.18
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*  
+
+| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|numpy/1.16.6-foss-2023a-Python-2.7.18|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/pytest.md b/mkdocs/docs/HPC/only/gent/available_software/detail/pytest.md
@@ -22,3 +22,4 @@ module load pytest/7.4.2-GCCcore-12.3.0
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
 |pytest/7.4.2-GCCcore-12.3.0|x|x|x|x|x|x|x|
+|pytest/4.6.11-GCC-12.3.0-Python-2.7.18|x|x|x|x|x|x|x|
diff --git a/mkdocs/extra/gent.yml b/mkdocs/extra/gent.yml
@@ -16,7 +16,7 @@ hpcname: hpcugent
 loginnode: login.hpc.ugent.be
 loginhost: gligar07.gastly.os
 altloginhost: gligar08.gastly.os
-modules_last_updated: Sun, 13 Oct 2024 at 15:44:25 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
+modules_last_updated: Tue, 15 Oct 2024 at 15:44:28 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
 # get these with ssh-keyscan gligar01.ugent.be > file
 # ssh-keygen -l -f file
 # ssh-keygen -l -f file -E md5