Update Modules [18 December 2024, 15:43]

hpcugentbot · Dec 18, 2024 · 2af5898 · 2af5898
1 parent a27461b
commit 2af5898
Show file tree

Hide file tree

Showing 24 changed files with 73 additions and 22 deletions.
diff --git a/mkdocs/docs/HPC/only/gent/available_software/data/json_data.json b/mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
diff --git a/mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json b/mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/BindCraft.md b/mkdocs/docs/HPC/only/gent/available_software/detail/BindCraft.md
@@ -14,11 +14,12 @@ The overview below shows which BindCraft installations are available per HPC-UGe
 To start using BindCraft, load one of these modules using a `module load` command like:
 
 ```shell
-module load BindCraft/1.1.0-foss-2023a
+module load BindCraft/1.1.0-foss-2023a-CUDA-12.1.1
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|BindCraft/1.1.0-foss-2023a-CUDA-12.1.1|x|-|x|-|x|-|-|
 |BindCraft/1.1.0-foss-2023a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/CSBDeep.md b/mkdocs/docs/HPC/only/gent/available_software/detail/CSBDeep.md
@@ -21,5 +21,5 @@ module load CSBDeep/0.7.4-foss-2023a
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|CSBDeep/0.7.4-foss-2023a|x|x|x|x|-|x|x|
+|CSBDeep/0.7.4-foss-2023a|x|x|x|x|x|x|x|
 |CSBDeep/0.7.4-foss-2022a|-|x|x|x|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/GST-plugins-bad.md b/mkdocs/docs/HPC/only/gent/available_software/detail/GST-plugins-bad.md
@@ -21,5 +21,5 @@ module load GST-plugins-bad/1.22.5-GCC-12.3.0
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|GST-plugins-bad/1.22.5-GCC-12.3.0|-|x|x|x|-|x|x|
+|GST-plugins-bad/1.22.5-GCC-12.3.0|x|x|x|x|x|x|x|
 |GST-plugins-bad/1.20.2-GCC-11.3.0|-|x|x|x|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/GST-plugins-base.md b/mkdocs/docs/HPC/only/gent/available_software/detail/GST-plugins-base.md
@@ -21,7 +21,7 @@ module load GST-plugins-base/1.22.5-GCC-12.3.0
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|GST-plugins-base/1.22.5-GCC-12.3.0|-|x|x|x|-|x|x|
+|GST-plugins-base/1.22.5-GCC-12.3.0|x|x|x|x|x|x|x|
 |GST-plugins-base/1.20.2-GCC-11.3.0|-|x|x|x|-|-|-|
 |GST-plugins-base/1.18.5-GCC-11.2.0|-|x|x|x|-|-|-|
 |GST-plugins-base/1.18.4-GCC-10.3.0|-|x|x|-|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/GStreamer.md b/mkdocs/docs/HPC/only/gent/available_software/detail/GStreamer.md
@@ -21,7 +21,7 @@ module load GStreamer/1.22.5-GCC-12.3.0
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|GStreamer/1.22.5-GCC-12.3.0|-|x|x|x|-|x|x|
+|GStreamer/1.22.5-GCC-12.3.0|x|x|x|x|x|x|x|
 |GStreamer/1.20.2-GCC-11.3.0|-|x|x|x|-|-|-|
 |GStreamer/1.18.5-GCC-11.2.0|-|x|x|x|-|-|-|
 |GStreamer/1.18.4-GCC-10.3.0|-|x|x|-|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/GTK4.md b/mkdocs/docs/HPC/only/gent/available_software/detail/GTK4.md
@@ -21,5 +21,5 @@ module load GTK4/4.13.1-GCC-12.3.0
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|GTK4/4.13.1-GCC-12.3.0|-|x|x|x|-|x|x|
+|GTK4/4.13.1-GCC-12.3.0|x|x|x|x|x|x|x|
 |GTK4/4.7.0-GCC-11.3.0|-|x|x|x|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Graphene.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Graphene.md
@@ -21,5 +21,5 @@ module load Graphene/1.10.8-GCCcore-12.3.0
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|Graphene/1.10.8-GCCcore-12.3.0|x|x|x|x|-|x|x|
+|Graphene/1.10.8-GCCcore-12.3.0|x|x|x|x|x|x|x|
 |Graphene/1.10.8-GCCcore-11.3.0|-|x|x|x|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/IGV.md b/mkdocs/docs/HPC/only/gent/available_software/detail/IGV.md
@@ -14,12 +14,13 @@ The overview below shows which IGV installations are available per HPC-UGent Tie
 To start using IGV, load one of these modules using a `module load` command like:
 
 ```shell
-module load IGV/2.9.4-Java-11
+module load IGV/2.19.1-Java-17
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|IGV/2.19.1-Java-17|x|x|x|x|-|x|x|
 |IGV/2.9.4-Java-11|-|x|x|-|-|-|-|
 |IGV/2.8.0-Java-11|-|x|x|-|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/OpenCV.md b/mkdocs/docs/HPC/only/gent/available_software/detail/OpenCV.md
@@ -21,7 +21,7 @@ module load OpenCV/4.8.1-foss-2023a-contrib
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|OpenCV/4.8.1-foss-2023a-contrib|-|x|x|x|-|x|x|
+|OpenCV/4.8.1-foss-2023a-contrib|x|x|x|x|-|x|x|
 |OpenCV/4.6.0-foss-2022a-contrib|-|x|x|x|-|-|-|
 |OpenCV/4.6.0-foss-2022a-CUDA-11.7.0-contrib|-|-|x|-|-|-|-|
 |OpenCV/4.5.5-foss-2021b-contrib|-|x|x|-|-|-|-|

diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/SMV.md b/mkdocs/docs/HPC/only/gent/available_software/detail/SMV.md
@@ -21,5 +21,5 @@ module load SMV/6.9.5-GCCcore-12.3.0
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|SMV/6.9.5-GCCcore-12.3.0|-|x|-|-|-|-|-|
+|SMV/6.9.5-GCCcore-12.3.0|x|x|x|x|x|x|x|
 |SMV/6.7.17-iccifort-2020.4.304|-|x|x|-|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Spectre.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Spectre.md
@@ -21,4 +21,4 @@ module load Spectre/0.2.1-foss-2023a
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|Spectre/0.2.1-foss-2023a|x|x|x|x|-|x|x|
+|Spectre/0.2.1-foss-2023a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/bin2cell.md b/mkdocs/docs/HPC/only/gent/available_software/detail/bin2cell.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+bin2cell
+========
+
+# Available modules
+
+
+The overview below shows which bin2cell installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using bin2cell, load one of these modules using a `module load` command like:
+
+```shell
+module load bin2cell/0.3.2-foss-2023a
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*  
+
+| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|bin2cell/0.3.2-foss-2023a|x|x|x|x|-|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/elfutils.md b/mkdocs/docs/HPC/only/gent/available_software/detail/elfutils.md
@@ -21,7 +21,7 @@ module load elfutils/0.189-GCCcore-12.3.0
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|elfutils/0.189-GCCcore-12.3.0|x|x|x|x|-|x|x|
+|elfutils/0.189-GCCcore-12.3.0|x|x|x|x|x|x|x|
 |elfutils/0.187-GCCcore-11.3.0|-|x|x|x|-|x|-|
 |elfutils/0.185-GCCcore-11.2.0|-|x|x|x|-|-|-|
 |elfutils/0.185-GCCcore-10.3.0|-|x|x|x|-|-|-|

diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/fastparquet.md b/mkdocs/docs/HPC/only/gent/available_software/detail/fastparquet.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+fastparquet
+===========
+
+# Available modules
+
+
+The overview below shows which fastparquet installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using fastparquet, load one of these modules using a `module load` command like:
+
+```shell
+module load fastparquet/2024.11.0-gfbf-2023a
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*  
+
+| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|fastparquet/2024.11.0-gfbf-2023a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/freeglut.md b/mkdocs/docs/HPC/only/gent/available_software/detail/freeglut.md
@@ -21,7 +21,7 @@ module load freeglut/3.4.0-GCCcore-12.3.0
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|freeglut/3.4.0-GCCcore-12.3.0|x|x|x|x|-|x|x|
+|freeglut/3.4.0-GCCcore-12.3.0|x|x|x|x|x|x|x|
 |freeglut/3.2.2-GCCcore-11.3.0|-|x|x|x|-|-|-|
 |freeglut/3.2.1-GCCcore-11.2.0|-|x|x|x|-|-|-|
 |freeglut/3.2.1-GCCcore-10.3.0|-|x|x|-|-|-|-|

diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/glew.md b/mkdocs/docs/HPC/only/gent/available_software/detail/glew.md
@@ -21,7 +21,7 @@ module load glew/2.2.0-GCCcore-12.3.0-osmesa
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|glew/2.2.0-GCCcore-12.3.0-osmesa|x|x|x|x|-|x|x|
+|glew/2.2.0-GCCcore-12.3.0-osmesa|x|x|x|x|x|x|x|
 |glew/2.2.0-GCCcore-12.2.0-egl|-|x|x|x|-|-|-|
 |glew/2.2.0-GCCcore-11.2.0-osmesa|-|x|x|x|-|-|-|
 |glew/2.2.0-GCCcore-11.2.0-egl|-|x|x|x|-|-|-|

diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/libdivsufsort.md b/mkdocs/docs/HPC/only/gent/available_software/detail/libdivsufsort.md
@@ -21,4 +21,4 @@ module load libdivsufsort/2.0.1-foss-2023a
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|libdivsufsort/2.0.1-foss-2023a|x|x|x|x|-|x|x|
+|libdivsufsort/2.0.1-foss-2023a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/libgd.md b/mkdocs/docs/HPC/only/gent/available_software/detail/libgd.md
@@ -22,7 +22,7 @@ module load libgd/2.3.3-GCCcore-13.2.0
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
 |libgd/2.3.3-GCCcore-13.2.0|-|x|x|x|-|x|x|
-|libgd/2.3.3-GCCcore-12.3.0|-|x|x|x|-|x|x|
+|libgd/2.3.3-GCCcore-12.3.0|x|x|x|x|x|x|x|
 |libgd/2.3.3-GCCcore-12.2.0|-|x|x|x|-|-|-|
 |libgd/2.3.3-GCCcore-11.3.0|-|x|x|x|-|-|-|
 |libgd/2.3.3-GCCcore-11.2.0|-|x|x|x|-|-|-|

diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/sdsl-lite.md b/mkdocs/docs/HPC/only/gent/available_software/detail/sdsl-lite.md
@@ -21,4 +21,4 @@ module load sdsl-lite/2.1.1-foss-2023a
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|sdsl-lite/2.1.1-foss-2023a|x|x|x|x|-|x|x|
+|sdsl-lite/2.1.1-foss-2023a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/stardist.md b/mkdocs/docs/HPC/only/gent/available_software/detail/stardist.md
@@ -14,11 +14,12 @@ The overview below shows which stardist installations are available per HPC-UGen
 To start using stardist, load one of these modules using a `module load` command like:
 
 ```shell
-module load stardist/0.8.3-foss-2021b
+module load stardist/0.8.5-foss-2023a
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|stardist/0.8.5-foss-2023a|x|x|x|x|x|x|x|
 |stardist/0.8.3-foss-2021b|-|x|x|x|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/wradlib.md b/mkdocs/docs/HPC/only/gent/available_software/detail/wradlib.md
@@ -21,4 +21,4 @@ module load wradlib/2.0.3-foss-2023a
 
 | |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|wradlib/2.0.3-foss-2023a|-|x|x|-|-|-|x|
+|wradlib/2.0.3-foss-2023a|x|x|x|x|x|x|x|
diff --git a/mkdocs/extra/gent.yml b/mkdocs/extra/gent.yml
@@ -16,7 +16,7 @@ hpcname: hpcugent
 loginnode: login.hpc.ugent.be
 loginhost: gligar07.gastly.os
 altloginhost: gligar08.gastly.os
-modules_last_updated: Tue, 17 Dec 2024 at 15:44:52 CET # This line is automatically updated by scripts/available_modules/available_modules.py
+modules_last_updated: Wed, 18 Dec 2024 at 15:44:55 CET # This line is automatically updated by scripts/available_modules/available_modules.py
 # get these with ssh-keyscan gligar01.ugent.be > file
 # ssh-keygen -l -f file
 # ssh-keygen -l -f file -E md5