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Auto Update Modules [27 September 2024, 11:03] #738

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Auto Update Modules [27 September 2024, 11:03] #738

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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
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2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json
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24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/CUDA-Python.md
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---
hide:
- toc
---

CUDA-Python
===========

# Available modules


The overview below shows which CUDA-Python installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using CUDA-Python, load one of these modules using a `module load` command like:

```shell
module load CUDA-Python/12.1.0-gfbf-2023a-CUDA-12.1.1
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|CUDA-Python/12.1.0-gfbf-2023a-CUDA-12.1.1|x|-|x|-|x|-|-|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/FLUENT.md
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Expand Up @@ -21,7 +21,7 @@ module load FLUENT/2024R2

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|FLUENT/2024R2|-|-|x|-|x|x|-|
|FLUENT/2024R2|x|x|x|x|x|x|x|
|FLUENT/2024R1|x|x|x|x|x|-|x|
|FLUENT/2023R1|x|x|x|x|x|-|x|
|FLUENT/2022R1|-|x|x|-|x|-|x|
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3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/HTSplotter.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which HTSplotter installations are available per HPC-UG
To start using HTSplotter, load one of these modules using a `module load` command like:

```shell
module load HTSplotter/2.11-foss-2022b
module load HTSplotter/2.11-foss-2023a
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|HTSplotter/2.11-foss-2023a|x|x|x|x|x|x|x|
|HTSplotter/2.11-foss-2022b|x|x|x|x|x|-|x|
|HTSplotter/0.15-foss-2022a|x|x|x|x|x|-|x|
2 changes: 1 addition & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/ISA-L.md
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Expand Up @@ -21,7 +21,7 @@ module load ISA-L/2.31.0-GCCcore-13.2.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|ISA-L/2.31.0-GCCcore-13.2.0|x|x|x|-|x|x|x|
|ISA-L/2.31.0-GCCcore-13.2.0|x|x|x|x|x|x|x|
|ISA-L/2.30.0-GCCcore-12.3.0|x|x|x|x|x|x|x|
|ISA-L/2.30.0-GCCcore-11.3.0|x|x|x|x|x|-|x|
|ISA-L/2.30.0-GCCcore-11.2.0|x|x|x|-|x|-|x|
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3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/SSW.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which SSW installations are available per HPC-UGent Tie
To start using SSW, load one of these modules using a `module load` command like:

```shell
module load SSW/1.1-GCCcore-10.2.0
module load SSW/1.1-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|SSW/1.1-GCCcore-12.3.0|x|x|x|x|x|x|x|
|SSW/1.1-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/SeqLib.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which SeqLib installations are available per HPC-UGent
To start using SeqLib, load one of these modules using a `module load` command like:

```shell
module load SeqLib/1.2.0-GCC-10.2.0
module load SeqLib/1.2.0-GCC-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|SeqLib/1.2.0-GCC-12.3.0|x|x|x|x|x|x|x|
|SeqLib/1.2.0-GCC-10.2.0|-|x|x|-|x|-|-|
1 change: 1 addition & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/VCFtools.md
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Expand Up @@ -22,4 +22,5 @@ module load VCFtools/0.1.16-iccifort-2019.5.281
| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|VCFtools/0.1.16-iccifort-2019.5.281|-|x|x|-|x|-|x|
|VCFtools/0.1.16-GCC-12.3.0|x|x|x|x|x|x|x|
|VCFtools/0.1.16-GCC-10.2.0|-|x|x|-|x|-|-|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/WFA2.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which WFA2 installations are available per HPC-UGent Ti
To start using WFA2, load one of these modules using a `module load` command like:

```shell
module load WFA2/2.3.3-GCCcore-11.3.0
module load WFA2/2.3.4-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|WFA2/2.3.4-GCCcore-12.3.0|x|x|x|x|x|x|x|
|WFA2/2.3.3-GCCcore-11.3.0|x|x|x|x|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/code-cli.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which code-cli installations are available per HPC-UGen
To start using code-cli, load one of these modules using a `module load` command like:

```shell
module load code-cli/1.85.1-x64
module load code-cli/1.93.1-x64
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|code-cli/1.93.1-x64|x|x|x|x|x|x|x|
|code-cli/1.85.1-x64|x|x|x|x|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/code-server.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which code-server installations are available per HPC-U
To start using code-server, load one of these modules using a `module load` command like:

```shell
module load code-server/4.9.1
module load code-server/4.93.1
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|code-server/4.93.1|x|x|x|x|x|x|x|
|code-server/4.9.1|x|x|x|x|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/fastahack.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which fastahack installations are available per HPC-UGe
To start using fastahack, load one of these modules using a `module load` command like:

```shell
module load fastahack/1.0.0-GCCcore-11.3.0
module load fastahack/1.0.0-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|fastahack/1.0.0-GCCcore-12.3.0|x|x|x|x|x|x|x|
|fastahack/1.0.0-GCCcore-11.3.0|x|x|x|x|x|-|x|
|fastahack/1.0.0-GCCcore-10.2.0|-|x|x|-|x|-|x|
4 changes: 2 additions & 2 deletions mkdocs/docs/HPC/only/gent/available_software/detail/fastp.md
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Expand Up @@ -21,8 +21,8 @@ module load fastp/0.23.4-GCC-13.2.0

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|fastp/0.23.4-GCC-13.2.0|x|x|x|-|x|x|x|
|fastp/0.23.4-GCC-12.3.0|x|x|x|-|x|x|x|
|fastp/0.23.4-GCC-13.2.0|x|x|x|x|x|x|x|
|fastp/0.23.4-GCC-12.3.0|x|x|x|x|x|x|x|
|fastp/0.23.2-GCC-11.2.0|x|x|x|-|x|-|x|
|fastp/0.20.1-iccifort-2020.1.217|-|x|x|-|x|-|-|
|fastp/0.20.0-iccifort-2019.5.281|-|x|-|-|-|-|-|
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3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/fermi-lite.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which fermi-lite installations are available per HPC-UG
To start using fermi-lite, load one of these modules using a `module load` command like:

```shell
module load fermi-lite/20190320-GCCcore-10.2.0
module load fermi-lite/20190320-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|fermi-lite/20190320-GCCcore-12.3.0|x|x|x|x|x|x|x|
|fermi-lite/20190320-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/filevercmp.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which filevercmp installations are available per HPC-UG
To start using filevercmp, load one of these modules using a `module load` command like:

```shell
module load filevercmp/20191210-GCCcore-11.3.0
module load filevercmp/20191210-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|filevercmp/20191210-GCCcore-12.3.0|x|x|x|x|x|x|x|
|filevercmp/20191210-GCCcore-11.3.0|x|x|x|x|x|-|x|
|filevercmp/20191210-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/freebayes.md
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Expand Up @@ -14,11 +14,12 @@ The overview below shows which freebayes installations are available per HPC-UGe
To start using freebayes, load one of these modules using a `module load` command like:

```shell
module load freebayes/1.3.5-GCC-10.2.0
module load freebayes/1.3.7-gfbf-2023a-R-4.3.2
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|freebayes/1.3.7-gfbf-2023a-R-4.3.2|x|x|x|x|x|x|x|
|freebayes/1.3.5-GCC-10.2.0|-|x|x|-|x|-|-|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/fsom.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which fsom installations are available per HPC-UGent Ti
To start using fsom, load one of these modules using a `module load` command like:

```shell
module load fsom/20151117-GCCcore-11.3.0
module load fsom/20151117-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|fsom/20151117-GCCcore-12.3.0|x|x|x|x|x|x|x|
|fsom/20151117-GCCcore-11.3.0|x|x|x|x|x|-|x|
|fsom/20141119-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/intervaltree.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which intervaltree installations are available per HPC-
To start using intervaltree, load one of these modules using a `module load` command like:

```shell
module load intervaltree/0.1-GCCcore-11.3.0
module load intervaltree/0.1-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|intervaltree/0.1-GCCcore-12.3.0|x|x|x|x|x|x|x|
|intervaltree/0.1-GCCcore-11.3.0|x|x|x|x|x|-|x|
|intervaltree/0.1-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/multichoose.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which multichoose installations are available per HPC-U
To start using multichoose, load one of these modules using a `module load` command like:

```shell
module load multichoose/1.0.3-GCCcore-11.3.0
module load multichoose/1.0.3-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|multichoose/1.0.3-GCCcore-12.3.0|x|x|x|x|x|x|x|
|multichoose/1.0.3-GCCcore-11.3.0|x|x|x|x|x|-|x|
|multichoose/1.0.3-GCCcore-10.2.0|-|x|x|-|x|-|x|
24 changes: 24 additions & 0 deletions mkdocs/docs/HPC/only/gent/available_software/detail/ont-remora.md
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---
hide:
- toc
---

ont-remora
==========

# Available modules


The overview below shows which ont-remora installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).

To start using ont-remora, load one of these modules using a `module load` command like:

```shell
module load ont-remora/3.3.0-foss-2023a
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|ont-remora/3.3.0-foss-2023a|x|x|x|x|x|x|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/smithwaterman.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which smithwaterman installations are available per HPC
To start using smithwaterman, load one of these modules using a `module load` command like:

```shell
module load smithwaterman/20160702-GCCcore-11.3.0
module load smithwaterman/20160702-GCCcore-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|smithwaterman/20160702-GCCcore-12.3.0|x|x|x|x|x|x|x|
|smithwaterman/20160702-GCCcore-11.3.0|x|x|x|x|x|-|x|
|smithwaterman/20160702-GCCcore-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/tabixpp.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which tabixpp installations are available per HPC-UGent
To start using tabixpp, load one of these modules using a `module load` command like:

```shell
module load tabixpp/1.1.2-GCC-11.3.0
module load tabixpp/1.1.2-GCC-12.3.0
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|tabixpp/1.1.2-GCC-12.3.0|x|x|x|x|x|x|x|
|tabixpp/1.1.2-GCC-11.3.0|x|x|x|x|x|-|x|
|tabixpp/1.1.0-GCC-10.2.0|-|x|x|-|x|-|x|
3 changes: 2 additions & 1 deletion mkdocs/docs/HPC/only/gent/available_software/detail/vcflib.md
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Expand Up @@ -14,12 +14,13 @@ The overview below shows which vcflib installations are available per HPC-UGent
To start using vcflib, load one of these modules using a `module load` command like:

```shell
module load vcflib/1.0.9-foss-2022a-R-4.2.1
module load vcflib/1.0.9-gfbf-2023a-R-4.3.2
```

*(This data was automatically generated on {{modules_last_updated}})*

| |accelgor|doduo|donphan|gallade|joltik|shinx|skitty|
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
|vcflib/1.0.9-gfbf-2023a-R-4.3.2|x|x|x|x|x|x|x|
|vcflib/1.0.9-foss-2022a-R-4.2.1|x|x|x|x|x|-|x|
|vcflib/1.0.2-GCC-10.2.0|-|x|x|-|x|-|x|
2 changes: 1 addition & 1 deletion mkdocs/extra/gent.yml
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Expand Up @@ -16,7 +16,7 @@ hpcname: hpcugent
loginnode: login.hpc.ugent.be
loginhost: gligar07.gastly.os
altloginhost: gligar08.gastly.os
modules_last_updated: Wed, 25 Sep 2024 at 11:04:20 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
modules_last_updated: Fri, 27 Sep 2024 at 11:04:20 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
# get these with ssh-keyscan gligar01.ugent.be > file
# ssh-keygen -l -f file
# ssh-keygen -l -f file -E md5
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