Merge pull request #658 from laraPPr/update_examples

Update modules in examples
hpcugent · Aug 5, 2024 · 187d271 · 187d271
2 parents 6754874 + e1c0f30
commit 187d271
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Showing 8 changed files with 9 additions and 9 deletions.
diff --git a/intro-HPC/examples/Compiling-and-testing-your-software-on-the-HPC/mpihello.pbs b/intro-HPC/examples/Compiling-and-testing-your-software-on-the-HPC/mpihello.pbs
@@ -12,6 +12,6 @@ cd $PBS_O_WORKDIR
   # load the environment
 
 module purge
-module load intel
+module load foss
 
 mpirun ./mpihello
diff --git a/intro-HPC/examples/HPC-UGent-GPU-clusters/TensorFlow_GPU.sh b/intro-HPC/examples/HPC-UGent-GPU-clusters/TensorFlow_GPU.sh
@@ -2,7 +2,7 @@
 #PBS -l walltime=5:0:0
 #PBS -l nodes=1:ppn=quarter:gpus=1
 
-module load TensorFlow/2.6.0-foss-2021a-CUDA-11.3.1
+module load TensorFlow/2.11.0-foss-2022a-CUDA-11.7.0
 
 cd $PBS_O_WORKDIR
 python example.py
diff --git a/intro-HPC/examples/Job-script-examples/multi_core.sh b/intro-HPC/examples/Job-script-examples/multi_core.sh
@@ -2,7 +2,7 @@
 #PBS -N mpi_hello             ## job name
 #PBS -l nodes=2:ppn=all       ## 2 nodes, all cores per node
 #PBS -l walltime=2:00:00      ## max. 2h of wall time
-module load intel/2017b
+module load foss/2023a
 module load vsc-mympirun      ## We don't use a version here, this is on purpose
 # go to working directory, compile and run MPI hello world
 cd $PBS_O_WORKDIR

diff --git a/intro-HPC/examples/Job-script-examples/single_core.sh b/intro-HPC/examples/Job-script-examples/single_core.sh
@@ -2,7 +2,7 @@
 #PBS -N count_example         ## job name
 #PBS -l nodes=1:ppn=1         ## single-node job, single core
 #PBS -l walltime=2:00:00      ## max. 2h of wall time
-module load Python/3.6.4-intel-2018a
+module load Python/3.11.3-GCCcore-12.3.0
 # copy input data from location where job was submitted from
 cp $PBS_O_WORKDIR/input.txt $TMPDIR
 # go to temporary working directory (on local disk) & run

diff --git a/intro-HPC/examples/MATLAB/jobscript.sh b/intro-HPC/examples/MATLAB/jobscript.sh
@@ -7,7 +7,7 @@
 #
 
 # make sure the MATLAB version matches with the one used to compile the MATLAB program!
-module load MATLAB/2018a
+module load MATLAB/2022b-r5
 
 # use temporary directory (not $HOME) for (mostly useless) MATLAB log files
 # subdir in $TMPDIR (if defined, or /tmp otherwise)

diff --git a/intro-HPC/examples/Multi-core-jobs-Parallel-Computing/mpi_hello.pbs b/intro-HPC/examples/Multi-core-jobs-Parallel-Computing/mpi_hello.pbs
@@ -11,6 +11,6 @@ cd $PBS_O_WORKDIR
 
   # load the environment
 
-module load intel
+module load foss
 
 mpirun ./mpi_hello
diff --git a/intro-HPC/examples/OpenFOAM/OpenFOAM_damBreak.sh b/intro-HPC/examples/OpenFOAM/OpenFOAM_damBreak.sh
@@ -2,7 +2,7 @@
 #PBS -l walltime=1:0:0
 #PBS -l nodes=1:ppn=4
 # check for more recent OpenFOAM modules with 'module avail OpenFOAM'
-module load OpenFOAM/6-intel-2018a
+module load OpenFOAM/11-foss-2023a
 source $FOAM_BASH
 # purposely not specifying a particular version to use most recent mympirun
 module load vsc-mympirun
@@ -15,7 +15,7 @@ export MYMPIRUN_VARIABLESPREFIX=WM_PROJECT,FOAM,MPI
 export WORKDIR=$VSC_SCRATCH_NODE/$PBS_JOBID  # for single-node jobs
 mkdir -p $WORKDIR
 # damBreak tutorial, see also https://cfd.direct/openfoam/user-guide/dambreak
-cp -r $FOAM_TUTORIALS/multiphase/interFoam/laminar/damBreak/damBreak $WORKDIR
+cp -r $FOAM_TUTORIALS/incompressibleVoF/damBreakLaminar/damBreak $WORKDIR
 cd $WORKDIR/damBreak
 echo "working directory: $PWD"
 # pre-processing: generate mesh

diff --git a/intro-HPC/examples/Program-examples/04_MPI_C/mpihello.pbs b/intro-HPC/examples/Program-examples/04_MPI_C/mpihello.pbs
@@ -13,6 +13,6 @@ cd $PBS_O_WORKDIR
   # load the environment
 
 module purge
-module load intel
+module load foss
 
 mpirun ./mpihello