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Fixed more links in the documentation
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VisLab committed Jun 23, 2024
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -14,7 +14,7 @@ Most of these datasets have complete versions available on
[**openNeuro**](https://openneuro.org/).
See [**datasets/README.md**](./datasets/README.md) for details.

The [**src**](https://github.com/hed-standard/hed-examples/tree/main/hedcode)
The [**src**](https://github.com/hed-standard/hed-examples/tree/main/src)
subdirectory contains Python Jupyter notebooks demonstrating calls to HedTools.
For MATLAB support for HED see the [**hed-matlab**](https://github.com/hed-standard/hed-matlab)
GitHub repository.
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29 changes: 11 additions & 18 deletions docs/source/HedSchemas.md
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Expand Up @@ -92,31 +92,24 @@ directory of the [**hed-schemas**](https://github.com/hed-standard/hed-schemas)

### The SCORE library

The HED SCORE library is an implementation of the [**SCORE**](https://hed-schemas.readthedocs.io/en/latest/hed_lisa_schema.html) standard for clinical annotation of EEG by neurologists.
The HED SCORE library is an implementation of the [**SCORE**](https://www.sciencedirect.com/science/article/pii/S1388245717309069?via%3Dihub) standard for clinical annotation of EEG by neurologists.
For more information and the latest references see
[**HED SCORE schema**](https://hed-schemas.readthedocs.io/en/latest/hed_score_schema.html).
[**HED SCORE schema**](https://github.com/hed-standard/hed-schemas/blob/main/library_schemas/score/README.md).

| Format | Type | Use |
|------------| ---- | ---- |
| XML | [**Raw**](https://raw.githubusercontent.com/hed-standard/hed-schemas/main/library_schemas/score/hedxml/HED_score_1.0.0.xml) | Accessed by tools for validation and analysis. |
| | [**Formatted**](https://github.com/hed-standard/hed-schemas/blob/main/library_schemas/score/hedxml/HED_score_1.0.0.xml) | Readable display. |
| MediaWiki | [**Raw**](https://raw.githubusercontent.com/hed-standard/hed-schemas/main/library_schemas/score/hedwiki/HED_score_1.0.0.mediawiki) | Edited to create a new schema. |
| | [**Formatted**](https://github.com/hed-standard/hed-schemas/blob/main/library_schemas/score/hedwiki/HED_score_1.0.0.mediawiki) | Readable display for editing. |
| XML | [**Raw**](https://raw.githubusercontent.com/hed-standard/hed-schemas/main/library_schemas/score/hedxml/HED_score_1.1.0.xml) | Accessed by tools for validation and analysis. |
| | [**Formatted**](https://github.com/hed-standard/hed-schemas/blob/main/library_schemas/score/hedxml/HED_score_1.1.0.xml) | Readable display. |
| MediaWiki | [**Raw**](https://raw.githubusercontent.com/hed-standard/hed-schemas/main/library_schemas/score/hedwiki/HED_score_1.1.0.mediawiki) | Edited to create a new schema. |
| | [**Formatted**](https://github.com/hed-standard/hed-schemas/blob/main/library_schemas/score/hedwiki/HED_score_1.1.0.mediawiki) | Readable display for editing. |
| Prerelease | [**Directory**](https://github.com/hed-standard/hed-schemas/tree/main/library_schemas/score/prerelease) | Working directory for developing the prerelease. |

### The LISA library
### The LANG library

The HED LISA library represents a vocabulary for annotating linguistic stimuli in language and other
The HED LANG library represents a vocabulary for annotating linguistic stimuli in language and other
types of experiments.
For more information and the latest references see
[**HED LISA schema**](https://hed-schemas.readthedocs.io/en/latest/hed_lisa_schema.html).
The LISA library is under development and is only available in prerelease format.

| Format | Type | Use |
|------------| ---- | ---- |
| XML | **Raw** | Accessed by tools for validation and analysis. |
| | [**Formatted**] | Readable display. |
| MediaWiki | [**Raw**] | Edited to create a new schema. |
| | [**Formatted**] | Readable display for editing. |
| Prerelease | [**Directory**](https://github.com/hed-standard/hed-schemas/tree/main/library_schemas/lisa/prerelease) | Working directory for developing the prerelease. |
[**HED LANG schema**](https://github.com/hed-standard/hed-schemas/blob/main/library_schemas/lang/README.md).
The LANG library is under development and is only available in
[**prerelease**](https://github.com/hed-standard/hed-schemas/tree/main/library_schemas/lang/prerelease) format.

1 change: 0 additions & 1 deletion docs/source/index.rst
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Expand Up @@ -58,7 +58,6 @@ HED was accepted (2019) into the top-level
thus becoming an integral part of the BIDS data storage standards for an ever-increasing
number of neuroimaging data modalities.


An efficient approach to integrating HED event descriptions into BIDS metadata has been
demonstrated in this `2021 paper <https://www.sciencedirect.com/science/article/pii/S1053811921010387?via%3Dihub>`_.

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2 changes: 1 addition & 1 deletion src/jupyter_notebooks/remodeling/README.md
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Expand Up @@ -7,7 +7,7 @@ restructuring tools through its command line interface.
## Quickstart

A quickstart overview of the remodeling process and supporting tools can be
found at [**Event file restructuring quickstart](https://hed-examples.readthedocs.io/en/latest/EventFileRestructuringQuickstart.html).
found at [**File remodeling quickstart](https://www.hed-resources.org/en/latest/FileRemodelingQuickstart.html).

## Installation requirements

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