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Quarto GHA Workflow Runner committed Aug 13, 2024
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2 changes: 1 addition & 1 deletion .nojekyll
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});
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.grid-cell img {
max-width: 50%; /* Make the image responsive */
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<div class="quarto-title-meta-heading">Modified</div>
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<section id="welcome-to-the-health-data-science-sandbox" class="level1 centered">
<h1 class="centered">Welcome to the Health Data Science Sandbox</h1>
<section id="a-collaborative-project-with-team-members-spanning-five-danish-universities" class="level3" style="text-align: center;">
<h3 class="anchored" data-anchor-id="a-collaborative-project-with-team-members-spanning-five-danish-universities">A collaborative project with team members spanning five Danish universities</h3>
<section id="access-our-training-modules" class="level3" style="text-align: center; padding:4px; background-color: #f0f0f0;">
<h3 class="anchored" data-anchor-id="access-our-training-modules">Access our training modules</h3>
</section>
<p>&nbsp;</p>
<div class="quarto-figure quarto-figure-center">
<figure class="figure">
<p><img src="images/Sandbox_workflow_ai_horizontal2w-01.png" class="img-fluid quarto-figure quarto-figure-center figure-img"></p>
</figure>
</div>
<p>The Health Data Science Sandbox is a national project coordinated by the <a href="https://heads.ku.dk/">Center for Health Data Science</a> at the University of Copenhagen. We’re working with a network of health data science experts to build training resources on academic supercomputers for students and researchers in Denmark. Our Sandbox contains <a href="./modules/index.html">training modules</a> that pair topical datasets with recommended analysis tools, pipelines, and learning materials/tutorials in a portable, containerized format.</p>
<div>

</div>
<div class="quarto-layout-panel" data-layout-nrow="1" data-layout-ncol="5">
<div class="layout-border quarto-layout-panel" data-layout-ncol="5" data-layout-nrow="1">
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<div class="column quarto-layout-cell" style="flex-basis: 20.0%;justify-content: flex-start;">
<p><a href="https://hds-sandbox.github.io/modules/#sandbox-hpc"><img src="../images/HPC.png" class="hover-target img-fluid" style="width:100.0%" alt="HPC Lab"></a> <strong><span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">HPC Lab</span></strong></p>
<div style="text-align: center;">
<pre><code>HPC launch
HPC pipes
RDM</code></pre>
</div>
</div>
<div class="column quarto-layout-cell" style="flex-basis: 20.0%;justify-content: flex-start;">
<p><a href="https://hds-sandbox.github.io/modules/#genomics"><img src="../images/genomics2.png" class="hover-target img-fluid" style="width:100.0%"></a> <strong><span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">Genomics</span></strong></p>
<div style="text-align: center;">
<pre><code>NGS data analysis
Population Genomics
GWAS</code></pre>
</div>
</div>
<div class="column quarto-layout-cell" style="flex-basis: 20.0%;justify-content: flex-start;">
<p><a href="https://hds-sandbox.github.io/modules/#transcriptomics"><img src="../images/transcriptomics.png" class="hover-target img-fluid" style="width:100.0%"></a> <strong><span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">Transcriptomics</span></strong></p>
<div style="text-align: center;">
<pre><code>Bulk RNAseq
Single-cell RNAseq</code></pre>
</div>
</div>
<div class="column quarto-layout-cell" style="flex-basis: 20.0%;justify-content: flex-start;">
<p><a href="https://hds-sandbox.github.io/modules/#proteomics"><img src="../images/proteomics.png" class="hover-target img-fluid" style="width:100.0%"></a> <strong><span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">Proteomics</span></strong></p>
<div style="text-align: center;">
<pre><code>Clinical Proteomics
ColabFold </code></pre>
</div>
</div>
<div class="column quarto-layout-cell" style="flex-basis: 20.0%;justify-content: flex-start;">
<p><a href="https://hds-sandbox.github.io/modules/##EHC"><img src="../images/EHRs.png" class="hover-target img-fluid" style="width:100.0%"></a> <strong><span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">Health records</span></strong></p>
<a href="https://hds-sandbox.github.io/modules/##EHC"><img src="../images/EHRs.png" class="hover-target img-fluid" style="width:100.0%"></a> <strong><span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">Health records</span></strong>
<div style="text-align: center;">
<pre><code>Synthetic data
Personalized Medicine </code></pre>
</div>
</div>
</div>
<p>&nbsp;</p>
</div>
<section id="we-are-a-collaborative-project-with-team-members-spanning-five-danish-universities" class="level3" style="text-align: center;">
<h3 class="anchored" data-anchor-id="we-are-a-collaborative-project-with-team-members-spanning-five-danish-universities">We are a collaborative project with team members spanning five Danish universities</h3>
</section>
<p>The Health Data Science Sandbox is a national project coordinated by the <a href="https://heads.ku.dk/">Center for Health Data Science</a> at the University of Copenhagen. We’re working with a network of health data science experts to build training resources on academic supercomputers for students and researchers in Denmark. Our Sandbox contains <a href="./modules/index.html">training modules</a> that pair topical datasets with recommended analysis tools, pipelines, and learning materials/tutorials in a portable, containerized format.</p>
<div class="quarto-figure quarto-figure-center">
<figure class="figure">
<p><img src="images/Sandbox_workflow_ai_horizontal2w-01.png" class="img-fluid quarto-figure quarto-figure-center figure-img"></p>
</figure>
</div>
<section id="to-get-involved-as-a-trainee-researcher-or-educator-in-denmark" class="level3" style="text-align: center;">
<h3 class="anchored" data-anchor-id="to-get-involved-as-a-trainee-researcher-or-educator-in-denmark">To get involved as a trainee, researcher, or educator in Denmark:</h3>
<p><strong>TRAINEES</strong>: <a href="./news.html">join</a> our next scheduled workshop or a supported university course</p>
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