KU Workshop 2023 June. Final version before vampirium setup

This is the release version used in the University of Copenhagen (KU) workshop on bulk RNAseq analysis in June 2023. It includes theory and materials to run a bulk RNAseq analysis starting from the preprocessing reads, including some experimental considerations and RNAseq theory.

This workshop is based on the materials developed by members of the teaching team at the Harvard Chan Bioinformatics Core (HBC), a collection of modified tutorials from the DESeq2, R language vignettes and the nf-core pipeline for bulk RNAseq.

In this release, we have moved all supplementary material (tdata, assignments, slides, etc). to the zenodo repository(10.5281/zenodo.7802718). We have also updated the paths of the files so they are not broken when using UCloud.

Note: this is the final version before the vampirium setup