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hds-sandbox · Jun 18, 2024 · e4a671b · e4a671b
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diff --git a/.nojekyll b/.nojekyll
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diff --git a/develop/02_experimental_planning.html b/develop/02_experimental_planning.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.554">
+<meta name="generator" content="quarto-1.4.555">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -186,7 +186,7 @@
     <div>
     <div class="quarto-title-meta-heading">Modified</div>
     <div class="quarto-title-meta-contents">
-      <p class="date-modified">May 29, 2024</p>
+      <p class="date-modified">June 18, 2024</p>
     </div>
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diff --git a/develop/03_data_explanation.html b/develop/03_data_explanation.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
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+<meta name="generator" content="quarto-1.4.555">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 

diff --git a/develop/04a_preprocessing.html b/develop/04a_preprocessing.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.554">
+<meta name="generator" content="quarto-1.4.555">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -313,7 +313,7 @@ <h2 class="anchored" data-anchor-id="quality-control-of-raw-sequencing-data">3.
 <span id="cb1-2"><a href="#cb1-2" aria-hidden="true" tabindex="-1"></a><span class="ex">CACTTGTAAGGGCAGGCCCCCTTCACCCTCCCGCTCCTGGGGGANNNNNNNNNNANNNCGAGGCCCTGGGGTAGAGGGNNNNNNNNNNNNNNGATCTTGG</span></span>
 <span id="cb1-3"><a href="#cb1-3" aria-hidden="true" tabindex="-1"></a><span class="ex">+</span></span>
 <span id="cb1-4"><a href="#cb1-4" aria-hidden="true" tabindex="-1"></a><span class="ex">@?@DDDDDDHHH?GH:?FCBGGB@C?DBEGIIIIAEF</span><span class="kw">;</span><span class="ex">FCGGI##################################################################################################################</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
-<table class="table">
+<table class="caption-top table">
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diff --git a/develop/04b_pipelines.html b/develop/04b_pipelines.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
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 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -421,7 +421,7 @@ <h4 class="anchored" data-anchor-id="samplesheet-input">Samplesheet input</h4>
 TREATMENT_REP2,AEG588A5_S5_L003_R1_001.fastq.gz,,reverse
 TREATMENT_REP3,AEG588A6_S6_L003_R1_001.fastq.gz,,reverse
 TREATMENT_REP3,AEG588A6_S6_L004_R1_001.fastq.gz,,reverse</code></pre>
-<table class="table">
+<table class="caption-top table">
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