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diff --git a/.nojekyll b/.nojekyll
@@ -1 +1 @@
-784778fa
+ecd95bac
diff --git a/develop/01_RDM_intro.html b/develop/01_RDM_intro.html
@@ -220,7 +220,7 @@
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="../develop/05_VC.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">5. Data Analysis with Version Control</span></a>
+ <span class="menu-text">5. Version Control with Git and GitHub</span></a>
   </div>
 </li>
           <li class="sidebar-item">
@@ -295,7 +295,7 @@ <h1 class="title">1. Introduction to RDM</h1>
     <div>
     <div class="quarto-title-meta-heading">Modified</div>
     <div class="quarto-title-meta-contents">
-      <p class="date-modified">May 3, 2024</p>
+      <p class="date-modified">May 9, 2024</p>
     </div>
   </div>
 
@@ -841,6 +841,15 @@ <h3 class="anchored" data-anchor-id="sources">Sources</h3>
 <ul>
 <li><a href="https://rdmkit.elixir-europe.org/index">RDMkit</a>: ELIXIR (2021) Research Data Management Kit. A deliverable from the EU-funded ELIXIR-CONVERGE project (grant agreement 871075).</li>
 </ul>
+<!-- script to open links in a new tab, add at the end (after doc has been loaded it sets attribute blank querying all object, links) -->
+<script>
+document.addEventListener('DOMContentLoaded', function () {
+    var links = document.querySelectorAll('a');
+    links.forEach(function(link) {
+        link.setAttribute('target', '_blank');
+    });
+});
+</script>
 
 
 

diff --git a/develop/02_DMP.html b/develop/02_DMP.html
@@ -200,7 +200,7 @@
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="../develop/05_VC.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">5. Data Analysis with Version Control</span></a>
+ <span class="menu-text">5. Version Control with Git and GitHub</span></a>
   </div>
 </li>
           <li class="sidebar-item">
@@ -261,7 +261,7 @@ <h1 class="title">2. Data Management Plan</h1>
     <div>
     <div class="quarto-title-meta-heading">Modified</div>
     <div class="quarto-title-meta-contents">
-      <p class="date-modified">May 3, 2024</p>
+      <p class="date-modified">May 9, 2024</p>
     </div>
   </div>
 
@@ -403,6 +403,15 @@ <h3 class="anchored" data-anchor-id="sources">Sources</h3>
 <li><a href="https://guides.library.stanford.edu/dmps">Stanford University Library Data Management Services website</a></li>
 <li><a href="https://rdm.elixir-belgium.org/about_DMP">RDM Guide, Elixir Belgium</a></li>
 </ul>
+<!-- script to open links in a new tab, add at the end -->
+<script>
+document.addEventListener('DOMContentLoaded', function () {
+    var links = document.querySelectorAll('a');
+    links.forEach(function(link) {
+        link.setAttribute('target', '_blank');
+    });
+});
+</script>
 
 
 </section>

diff --git a/develop/03_DOD.html b/develop/03_DOD.html
@@ -234,7 +234,7 @@
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="../develop/05_VC.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">5. Data Analysis with Version Control</span></a>
+ <span class="menu-text">5. Version Control with Git and GitHub</span></a>
   </div>
 </li>
           <li class="sidebar-item">
@@ -311,7 +311,7 @@ <h1 class="title">3. Data organization and storage</h1>
     <div>
     <div class="quarto-title-meta-heading">Modified</div>
     <div class="quarto-title-meta-contents">
-      <p class="date-modified">May 3, 2024</p>
+      <p class="date-modified">May 9, 2024</p>
     </div>
   </div>
 
@@ -933,6 +933,15 @@ <h3 class="anchored" data-anchor-id="sources">Sources</h3>
 <li>Cessda guidelines: <a href="https://dmeg.cessda.eu/Data-Management-Expert-Guide/2.-Organise-Document/File-naming-and-folder-structure" class="uri">https://dmeg.cessda.eu/Data-Management-Expert-Guide/2.-Organise-Document/File-naming-and-folder-structure</a>.</li>
 <li>RDMkit Elixir Europe: <a href="https://rdmkit.elixir-europe.org/data_organisation" class="uri">https://rdmkit.elixir-europe.org/data_organisation</a></li>
 </ul>
+<!-- script to open links in a new tab, add at the end -->
+<script>
+document.addEventListener('DOMContentLoaded', function () {
+    var links = document.querySelectorAll('a');
+    links.forEach(function(link) {
+        link.setAttribute('target', '_blank');
+    });
+});
+</script>
 
 
 </section>

diff --git a/develop/04_metadata.html b/develop/04_metadata.html
@@ -234,7 +234,7 @@
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="../develop/05_VC.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">5. Data Analysis with Version Control</span></a>
+ <span class="menu-text">5. Version Control with Git and GitHub</span></a>
   </div>
 </li>
           <li class="sidebar-item">
@@ -305,7 +305,7 @@ <h1 class="title">4. Documentation for biodata</h1>
     <div>
     <div class="quarto-title-meta-heading">Modified</div>
     <div class="quarto-title-meta-contents">
-      <p class="date-modified">May 3, 2024</p>
+      <p class="date-modified">May 9, 2024</p>
     </div>
   </div>
 
@@ -905,6 +905,15 @@ <h3 class="anchored" data-anchor-id="tools-and-software">Tools and software</h3>
 <li><a href="https://pypi.org/project/owlready2/">Owlready2</a>: Python package, enables the loading of ontologies as Python objects. This versatile tool allows users to manipulate and store ontology classes, instances, and properties as needed.</li>
 <li><a href="https://shiny.posit.co/">Shiny Apps</a>: easy interactive web apps for data science</li>
 </ul>
+<!-- script to open links in a new tab, add at the end -->
+<script>
+document.addEventListener('DOMContentLoaded', function () {
+    var links = document.querySelectorAll('a');
+    links.forEach(function(link) {
+        link.setAttribute('target', '_blank');
+    });
+});
+</script>
 
 
 </section>

diff --git a/develop/05_VC.html b/develop/05_VC.html
@@ -133,7 +133,7 @@
       <button type="button" class="quarto-btn-toggle btn" data-bs-toggle="collapse" data-bs-target=".quarto-sidebar-collapse-item" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
         <i class="bi bi-layout-text-sidebar-reverse"></i>
       </button>
-        <nav class="quarto-page-breadcrumbs" aria-label="breadcrumb"><ol class="breadcrumb"><li class="breadcrumb-item"><a href="../develop/03_DOD.html">Key practices</a></li><li class="breadcrumb-item"><a href="../develop/05_VC.html">5. Data Analysis with Version Control</a></li></ol></nav>
+        <nav class="quarto-page-breadcrumbs" aria-label="breadcrumb"><ol class="breadcrumb"><li class="breadcrumb-item"><a href="../develop/03_DOD.html">Key practices</a></li><li class="breadcrumb-item"><a href="../develop/05_VC.html">5. Version Control with Git and GitHub</a></li></ol></nav>
         <a class="flex-grow-1" role="button" data-bs-toggle="collapse" data-bs-target=".quarto-sidebar-collapse-item" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">      
         </a>
       <button type="button" class="btn quarto-search-button" aria-label="" onclick="window.quartoOpenSearch();">
@@ -200,7 +200,7 @@
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="../develop/05_VC.html" class="sidebar-item-text sidebar-link active">
- <span class="menu-text">5. Data Analysis with Version Control</span></a>
+ <span class="menu-text">5. Version Control with Git and GitHub</span></a>
   </div>
 </li>
           <li class="sidebar-item">
@@ -227,9 +227,7 @@
     <h2 id="toc-title">On this page</h2>
 
   <ul>
-  <li><a href="#data-analysis-best-practices-version-control-with-git-and-github" id="toc-data-analysis-best-practices-version-control-with-git-and-github" class="nav-link active" data-scroll-target="#data-analysis-best-practices-version-control-with-git-and-github">Data Analysis Best Practices: Version Control with Git and GitHub</a>
-  <ul class="collapse">
-  <li><a href="#version-control" id="toc-version-control" class="nav-link" data-scroll-target="#version-control">Version control</a>
+  <li><a href="#best-practices-in-data-analysis" id="toc-best-practices-in-data-analysis" class="nav-link active" data-scroll-target="#best-practices-in-data-analysis">Best Practices in Data Analysis</a>
   <ul class="collapse">
   <li><a href="#version-control-using-git" id="toc-version-control-using-git" class="nav-link" data-scroll-target="#version-control-using-git">Version control using Git</a></li>
   <li><a href="#github-hosting-for-git" id="toc-github-hosting-for-git" class="nav-link" data-scroll-target="#github-hosting-for-git">GitHub Hosting for Git</a></li>
@@ -240,16 +238,15 @@ <h2 id="toc-title">On this page</h2>
   <ul class="collapse">
   <li><a href="#sources" id="toc-sources" class="nav-link" data-scroll-target="#sources">Sources</a></li>
   </ul></li>
-  </ul></li>
   </ul>
 </nav>
     </div>
 <!-- main -->
 <main class="content" id="quarto-document-content">
 
-<header id="title-block-header" class="quarto-title-block default"><nav class="quarto-page-breadcrumbs quarto-title-breadcrumbs d-none d-lg-block" aria-label="breadcrumb"><ol class="breadcrumb"><li class="breadcrumb-item"><a href="../develop/03_DOD.html">Key practices</a></li><li class="breadcrumb-item"><a href="../develop/05_VC.html">5. Data Analysis with Version Control</a></li></ol></nav>
+<header id="title-block-header" class="quarto-title-block default"><nav class="quarto-page-breadcrumbs quarto-title-breadcrumbs d-none d-lg-block" aria-label="breadcrumb"><ol class="breadcrumb"><li class="breadcrumb-item"><a href="../develop/03_DOD.html">Key practices</a></li><li class="breadcrumb-item"><a href="../develop/05_VC.html">5. Version Control with Git and GitHub</a></li></ol></nav>
 <div class="quarto-title">
-<h1 class="title">5. Data Analysis with Version Control</h1>
+<h1 class="title">5. Version Control with Git and GitHub</h1>
 </div>
 
 
@@ -267,7 +264,7 @@ <h1 class="title">5. Data Analysis with Version Control</h1>
     <div>
     <div class="quarto-title-meta-heading">Modified</div>
     <div class="quarto-title-meta-contents">
-      <p class="date-modified">May 3, 2024</p>
+      <p class="date-modified">May 9, 2024</p>
     </div>
   </div>
 
@@ -278,8 +275,6 @@ <h1 class="title">5. Data Analysis with Version Control</h1>
 </header>
 
 
-<section id="data-analysis-best-practices-version-control-with-git-and-github" class="level1">
-<h1>Data Analysis Best Practices: Version Control with Git and GitHub</h1>
 <div class="callout callout-style-default callout-note callout-titled" title="Course Overview">
 <div class="callout-header d-flex align-content-center">
 <div class="callout-icon-container">
@@ -300,9 +295,9 @@ <h1>Data Analysis Best Practices: Version Control with Git and GitHub</h1>
 </ol>
 </div>
 </div>
+<section id="best-practices-in-data-analysis" class="level2">
+<h2 class="anchored" data-anchor-id="best-practices-in-data-analysis">Best Practices in Data Analysis</h2>
 <p>This lesson introduces version control with Git and Github and its significance in research. You will gain the ability to create Git repositories, and skills to build GitHub pages for showcasing data analysis.</p>
-<section id="version-control" class="level2">
-<h2 class="anchored" data-anchor-id="version-control">Version control</h2>
 <p>Version control systematically tracks project changes, documenting alterations for understanding project evolution. It holds significant importance in research data management, software development, and data analysis, offering numerous advantages.</p>
 <div class="callout callout-style-default callout-note callout-titled" title="Advantages of using version control">
 <div class="callout-header d-flex align-content-center">
@@ -500,7 +495,7 @@ <h3 class="anchored" data-anchor-id="github-pages">Github pages</h3>
 </section>
 <section id="step-by-step-setup-guide" class="level3">
 <h3 class="anchored" data-anchor-id="step-by-step-setup-guide">Step-by-Step Setup Guide</h3>
-<p>We provide an example of setting up Git, MkDocs, and a GitHub account, enabling you to replicate the process independently! (see <em>Exercise 5</em> in the <a href="../develop/practical_workshop.html">practical material</a>)</p>
+<p>We provide an example of setting up Git, Quarto, and a GitHub account, enabling you to replicate the process independently! (see <em>Exercise 5</em> in the <a href="../develop/practical_workshop.html">practical material</a>)</p>
 </section>
 </section>
 <section id="wrap-up" class="level2">
@@ -509,12 +504,20 @@ <h2 class="anchored" data-anchor-id="wrap-up">Wrap up</h2>
 <section id="sources" class="level3">
 <h3 class="anchored" data-anchor-id="sources">Sources</h3>
 <ul>
-<li><a href="https://guides.library.jhu.edu/c.php?g=1096705&amp;p=8066729">Version Control and Code Repository Link</a>.</li>
-<li><a href="https://education.github.com/git-cheat-sheet-education.pdf">Git cheat sheet</a>.</li>
+<li><a href="https://guides.library.jhu.edu/c.php?g=1096705&amp;p=8066729">Version Control and Code Repository Link</a></li>
+<li><a href="https://education.github.com/git-cheat-sheet-education.pdf">Git cheat sheet</a></li>
 </ul>
+<!-- script to open links in a new tab, add at the end -->
+<script>
+document.addEventListener('DOMContentLoaded', function () {
+    var links = document.querySelectorAll('a');
+    links.forEach(function(link) {
+        link.setAttribute('target', '_blank');
+    });
+});
+</script>
 
 
-</section>
 </section>
 </section>