update slow5lib to dev · hasindu2008/slow5tools@b3bf155

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update slow5lib to dev

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hasindu2008 committed Nov 16, 2023

1 parent db7514b commit b3bf155

+11 −0		.github/workflows/c-cpp.yml
+2 −2		.github/workflows/python.yml
+10 −2		CMakeLists.txt
+3 −5		docs/slow5_api/low_level_api/slow5_idx_load_with.md
+3 −0		docs/slow5_api/slow5.md
+3 −0		docs/slow5_api/slow5_internal.md
+1 −1		docs/slow5_api/slow5_low_level_api.md
+1 −1		include/slow5/slow5_defs.h
+9 −0		include/slow5/slow5_mt.h
+1 −1		setup.py
+20 −14		src/slow5_idx.c
+2 −0		src/slow5_idx.h
+13 −4		src/slow5_mt.c
+10 −5		test/.gitignore
+10 −5		test/bench/build.sh
+1 −1		test/bench/convert_to_pa.c
+1 −1		test/bench/convert_to_pa_rand.c
+6 −13		test/bench/get_all.c
+5 −15		test/bench/get_read_ids.c
+9 −21		test/bench/get_read_number_rand.c
+9 −21		test/bench/get_sample_count_rand.c
+8 −15		test/bench/get_samples.c
+11 −19		test/bench/get_samples_no_pipelining.c
+9 −21		test/bench/get_samples_rand.c
+15 −0		test/bench/readme.md