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edit python package version for diskann baseline #169

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merged 3 commits into from
Oct 2, 2023
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Merged

edit python package version for diskann baseline #169

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a51ae9a
edit python package version for diskann baseline
harsha-simhadri Sep 26, 2023
21b1c4b
don't plot streaming track results.
maumueller Oct 2, 2023
30f54f0
remove empty runs
maumueller Oct 2, 2023
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5 changes: 4 additions & 1 deletion .github/workflows/neurips23.yml
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Expand Up @@ -44,7 +44,10 @@ jobs:
python create_dataset.py --dataset $DATASET
python run.py --algorithm $ALGO --max-n-algorithms 2 --neurips23track $TRACK --dataset $DATASET --timeout 600
sudo chmod -R 777 results/
python plot.py --dataset $DATASET --neurips23track $TRACK --output plot.png
if [ $TRACK != streaming ]
then
python plot.py --dataset $DATASET --neurips23track $TRACK --output plot.png
fi
python data_export.py --output test.csv

env:
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1 change: 1 addition & 0 deletions data_export.py
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Expand Up @@ -106,6 +106,7 @@ def cleaned_run_metric(run_metrics):
run_metrics = compute_metrics_all_runs(dataset, dataset_name, results, args.recompute, \
args.sensors, args.search_times, args.private_query, neurips23track=track)
dfs.append(pd.DataFrame(cleaned_run_metric(run_metrics)))
dfs = [e for e in dfs if len(e) > 0]
if len(dfs) > 0:
data = pd.concat(dfs)
data = data.sort_values(by=["algorithm", "dataset", "recall/ap"])
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4 changes: 2 additions & 2 deletions neurips23/ood/diskann/Dockerfile
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Expand Up @@ -6,9 +6,9 @@ RUN add-apt-repository -y ppa:git-core/ppa
RUN apt update
RUN DEBIAN_FRONTEND=noninteractive apt install -y git make cmake g++ libaio-dev libgoogle-perftools-dev libunwind-dev clang-format libboost-dev libboost-program-options-dev libmkl-full-dev libcpprest-dev python3.10

RUN git clone https://github.com/microsoft/DiskANN.git --branch 0.5.0.rc3
RUN git clone https://github.com/microsoft/DiskANN.git --branch 0.5.0.rc3.post1
WORKDIR /home/app/DiskANN
RUN pip3 install virtualenv build
RUN python3 -m build
RUN pip install dist/diskannpy-0.5.0rc3-cp310-cp310-linux_x86_64.whl
RUN pip install dist/diskannpy-0.5.0rc3.post1-cp310-cp310-linux_x86_64.whl
WORKDIR /home/app
4 changes: 2 additions & 2 deletions neurips23/streaming/diskann/Dockerfile
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Expand Up @@ -6,9 +6,9 @@ RUN add-apt-repository -y ppa:git-core/ppa
RUN apt update
RUN DEBIAN_FRONTEND=noninteractive apt install -y git make cmake g++ libaio-dev libgoogle-perftools-dev libunwind-dev clang-format libboost-dev libboost-program-options-dev libmkl-full-dev libcpprest-dev python3.10

RUN git clone https://github.com/microsoft/DiskANN.git --branch 0.5.0.rc3
RUN git clone https://github.com/microsoft/DiskANN.git --branch 0.5.0.rc3.post1
WORKDIR /home/app/DiskANN
RUN pip3 install virtualenv build
RUN python3 -m build
RUN pip install dist/diskannpy-0.5.0rc3-cp310-cp310-linux_x86_64.whl
RUN pip install dist/diskannpy-0.5.0rc3.post1-cp310-cp310-linux_x86_64.whl
WORKDIR /home/app