added + character to hybrid tips in dup-counts output

gwct · Mar 24, 2023 · 2481439 · 2481439
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commit 2481439
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diff --git a/CHANGELOG.txt b/CHANGELOG.txt
@@ -1,3 +1,6 @@
+2023.03.24
+- Hybrid tip labels now have '+' added to them in the dup-counts output
+
 2023.03.11
 - Re-factored code
 - Removed `-d` and replaced with the `--st-only` and `--no-st` options, which seems clearer

diff --git a/grampa_lib/mul_out.py b/grampa_lib/mul_out.py
@@ -161,7 +161,10 @@ def mainOut(globs, all_scores, lowest_maps, multiple_maps):
 				## End map loop
 
 				for node in main_dups:
-					outline = [str(mul_num), node, str(main_dups[node])];
+					out_node = node;
+					if node in hybrid_clade:
+						out_node = node + "+";
+					outline = [str(mul_num), out_node, str(main_dups[node])];
 					dupout.write("\t".join(outline) + "\n");			
 				# Write out the counts per node
 			## For the lowest scoring trees, also output counts of duplications per node