_fix__set_globals_and_seq_args_misprime_lib_mishyb_lib

grinner · Feb 15, 2024 · d64d8e2 · d64d8e2
1 parent 5b3d006
commit d64d8e2
Showing 1 changed file with 21 additions and 14 deletions.
diff --git a/primer3/thermoanalysis.pyx b/primer3/thermoanalysis.pyx
@@ -1213,22 +1213,29 @@ cdef class _ThermoAnalysis:
         err_msg = ''
         try:
             global_settings_data = <p3_global_settings*> self.global_settings_data
-            if misprime_lib != None:
-                mp_lib = pdh_create_seq_lib(misprime_lib)
-                if mp_lib == NULL:
-                    err_msg = f'Issue creating misprime_lib {misprime_lib}'
-                    raise ValueError(
-                        f'Issue creating misprime_lib {misprime_lib}'
-                    )
 
-                global_settings_data[0].p_args.repeat_lib = mp_lib
+            if misprime_lib is None:
+                misprime_lib = {}
+
+            mp_lib = pdh_create_seq_lib(misprime_lib)
+            if mp_lib == NULL:
+                err_msg = f'Issue creating misprime_lib {misprime_lib}'
+                raise ValueError(
+                    f'Issue creating misprime_lib {misprime_lib}'
+                )
+
+            global_settings_data[0].p_args.repeat_lib = mp_lib
+
+            if mishyb_lib is None:
+                mishyb_lib = {}
+
+            mh_lib = pdh_create_seq_lib(mishyb_lib)
+            if mh_lib == NULL:
+                err_msg = f'Issue creating mishyb_lib: {mishyb_lib}'
+                raise ValueError(err_msg)
+
+            global_settings_data[0].o_args.repeat_lib = mh_lib
 
-            if mishyb_lib != None:
-                mh_lib = pdh_create_seq_lib(mishyb_lib)
-                if mh_lib == NULL:
-                    err_msg = f'Issue creating mishyb_lib: {mishyb_lib}'
-                    raise ValueError(err_msg)
-                global_settings_data[0].o_args.repeat_lib = mh_lib
         except (OSError, TypeError) as exc:
             p3_destroy_global_settings(
                 <p3_global_settings*> self.global_settings_data