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python3.8 pip install pvactools ERROR #819

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darkmoon1991 opened this issue Jul 6, 2022 · 1 comment
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python3.8 pip install pvactools ERROR #819

darkmoon1991 opened this issue Jul 6, 2022 · 1 comment

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@darkmoon1991
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I followed the instructions but find these errors
image
image

@susannasiebert
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Thank you for your interest in pVACtools. I apologize for the issues you're running into with installing our tool. This is, unfortunately, a side effect of our dependency on vaxrank/varcode, which in turn still uses vcfpy (see openvax/varcode#247). vcfpy cannot be installed with setuptools 58+ due to the deprecated usage of use_2to3 as described in #712. The solution would be to downgrade setuptools to an older version that still supports use_2to3. If that is not possible, we recommend using one of our docker containers.

I'm closing this issue as a duplicate of #712.

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