Merge pull request #34 from JaimeCernuda/master

added a non_equal map for pbs to support parameters like q that are j…

jarvis_util/shell/pbs_exec.py

@@ -39,9 +39,12 @@ def generate_qsub_command(self):
  if self.interactive:
  cmd += ' -I'
 
- options_map = {
+ equal_map = {
  'filesystems': 'l filesystems',
  'walltime': 'l walltime',
+ }
+
+ non_equal_map ={
  'account': 'A',
  'queue': 'q'
  }
@@ -53,11 +56,16 @@ def generate_qsub_command(self):
  else:
  raise ValueError("System defined without select value.")
 
- for attr, option in options_map.items():
+ for attr, option in equal_map.items():
  value = getattr(self, attr)
  if value is not None:
  cmd += f' -{option}={value}'
 
+ for attr, option in non_equal_map.items():
+ value = getattr(self, attr)
+ if value is not None:
+ cmd += f' -{option} {value}'
+
  cmd += f' {self.cmd}'
  return cmd