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abretaud committed Nov 24, 2023
1 parent 94e82aa commit 5cf9626
Showing 1 changed file with 1 addition and 5 deletions.
6 changes: 1 addition & 5 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ RUN rm -rf /tmp/biomaj-prometheus-multiproc && \

# Install docker to allow docker execution from process-message
RUN buildDeps='gnupg2 dirmngr software-properties-common' \

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DL3004 error: Do not use sudo as it leads to unpredictable behavior. Use a tool like gosu to enforce root
&& add-apt-repository "deb [arch=amd64] https://download.docker.com/linux/debian $(lsb_release -cs) stable" \
&& echo 'deb [arch=amd64] https://download.docker.com/linux/debian buster stable' | sudo tee /etc/apt/sources.list.d/docker.list \
&& apt-get update \
&& apt-get install -y apt-transport-https curl libcurl4-openssl-dev python3-pycurl python3-setuptools python3-pip git unzip bzip2 ca-certificates jq --no-install-recommends \
&& apt-get install -y $buildDeps --no-install-recommends \
Expand Down Expand Up @@ -94,10 +94,6 @@ RUN mkdir /data /config

ENV PATH=$PATH:/opt/conda/bin

#RUN conda config --add channels r
#RUN conda config --add channels bioconda
#RUN conda upgrade -y conda

VOLUME ["/data", "/config"]

RUN mkdir -p /var/lib/biomaj/data
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