conda recipe #12
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: conda recipe | |
| # Controls when the workflow will run | |
| on: | |
| # Triggers the workflow on schedule but only for the default branch (which is master) | |
| schedule: | |
| - cron: '0 7 5,20 * *' | |
| # on: [push] #to any branch | |
| # Allows you to run this workflow manually from the Actions tab | |
| # workflow_dispatch: | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "check_recipe" | |
| check_recipe: | |
| name: test bioconda recipes on ${{ matrix.os }} with python ${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: ['ubuntu-latest','macos-latest'] | |
| python-version: ['3.8'] | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v2 | |
| # Setting up miniconda | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| mamba-version: "*" | |
| python-version: ${{ matrix.python-version }} | |
| channels: conda-forge,bioconda,defaults | |
| activate-environment: test | |
| - name: Set up test environment | |
| shell: bash -l {0} | |
| run: | | |
| mamba install -y binette | |
| - name: check installation | |
| shell: bash -l {0} | |
| run: | | |
| python --version | |
| binette --version |