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Prepare release v1.0.9
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seppinho committed Dec 20, 2024
1 parent bcb08bd commit ed1e6ed
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4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -31,13 +31,13 @@ Please cite [our paper](https://academic.oup.com/nargab/article/6/1/lqae015/7602
2. Run the pipeline on a test dataset

```
nextflow run genepi/nf-gwas -r v1.0.8 -profile test,<docker,singularity,slurm,slurm_with_scratch>
nextflow run genepi/nf-gwas -r v1.0.9 -profile test,<docker,singularity,slurm,slurm_with_scratch>
```

3. Run the pipeline on your data

```
nextflow run genepi/nf-gwas -c <nextflow.config> -r v1.0.8 -profile <docker,singularity,slurm,slurm_with_scratch>
nextflow run genepi/nf-gwas -c <nextflow.config> -r v1.0.9 -profile <docker,singularity,slurm,slurm_with_scratch>
```

Please click [here](tests) for available test config files.
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4 changes: 2 additions & 2 deletions nextflow.config
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@@ -1,7 +1,7 @@

manifest {
name = 'nf-gwas'
version = '1.0.8'
version = '1.0.9'
description = 'A Nextflow GWAS pipeline.'
author = 'Lukas Forer and Sebastian Schönherr'
homePage = 'https://github.com/genepi/nf-gwas'
Expand Down Expand Up @@ -115,7 +115,7 @@ params {
// Load base.config by default for all pipelines
includeConfig 'conf/base.config'

process.container = 'quay.io/genepi/nf-gwas:v1.0.8'
process.container = 'quay.io/genepi/nf-gwas:v1.0.9'

profiles {
debug { process.beforeScript = 'echo $HOSTNAME' }
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