PGCA: An Algorithm to Link Protein Groups Created from MS/MS Data

Installation

The latest version of the R package can be installed directly from this repository. First the dependencies and tools have to be installed into R:

# Install dependencies
install.packages(c("knitr", "devtools"))

When the dependencies are fulfilled, the devtools package can be used to install the pgca package:

# Install pgca
library(devtools)
install_github("gcohenfr/pgca", build_vignettes = TRUE)

Usage

To get a quick introduction how to use the package, simply look at the vignette:

vignette("intro", package = "pgca")