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Merge pull request #674 from martenson/qiime2
add qiime2 to main
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| tool_panel_section_label: QIIME2 | ||
| tools: | ||
| - name: qiime2__alignment__mafft | ||
| owner: q2d2 | ||
| - name: qiime2__alignment__mafft_add | ||
| owner: q2d2 | ||
| - name: qiime2__alignment__mask | ||
| owner: q2d2 | ||
| - name: qiime2__composition__add_pseudocount | ||
| owner: q2d2 | ||
| - name: qiime2__composition__ancom | ||
| owner: q2d2 | ||
| - name: qiime2__composition__ancombc | ||
| owner: q2d2 | ||
| - name: qiime2__composition__tabulate | ||
| owner: q2d2 | ||
| - name: qiime2__cutadapt__demux_paired | ||
| owner: q2d2 | ||
| - name: qiime2__cutadapt__demux_single | ||
| owner: q2d2 | ||
| - name: qiime2__cutadapt__trim_paired | ||
| owner: q2d2 | ||
| - name: qiime2__cutadapt__trim_single | ||
| owner: q2d2 | ||
| - name: qiime2__dada2__denoise_ccs | ||
| owner: q2d2 | ||
| - name: qiime2__dada2__denoise_paired | ||
| owner: q2d2 | ||
| - name: qiime2__dada2__denoise_pyro | ||
| owner: q2d2 | ||
| - name: qiime2__dada2__denoise_single | ||
| owner: q2d2 | ||
| - name: qiime2__deblur__denoise_16S | ||
| owner: q2d2 | ||
| - name: qiime2__deblur__denoise_other | ||
| owner: q2d2 | ||
| - name: qiime2__deblur__visualize_stats | ||
| owner: q2d2 | ||
| - name: qiime2__demux__emp_paired | ||
| owner: q2d2 | ||
| - name: qiime2__demux__emp_single | ||
| owner: q2d2 | ||
| - name: qiime2__demux__filter_samples | ||
| owner: q2d2 | ||
| - name: qiime2__demux__subsample_paired | ||
| owner: q2d2 | ||
| - name: qiime2__demux__subsample_single | ||
| owner: q2d2 | ||
| - name: qiime2__demux__summarize | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__adonis | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__alpha | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__alpha_correlation | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__alpha_group_significance | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__alpha_phylogenetic | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__alpha_rarefaction | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__beta | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__beta_correlation | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__beta_group_significance | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__beta_phylogenetic | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__beta_rarefaction | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__bioenv | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__core_metrics | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__core_metrics_phylogenetic | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__filter_distance_matrix | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__mantel | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__pcoa | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__pcoa_biplot | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__procrustes_analysis | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__tsne | ||
| owner: q2d2 | ||
| - name: qiime2__diversity__umap | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__alpha_passthrough | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__beta_passthrough | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__beta_phylogenetic_meta_passthrough | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__beta_phylogenetic_passthrough | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__bray_curtis | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__faith_pd | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__jaccard | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__observed_features | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__pielou_evenness | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__shannon_entropy | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__unweighted_unifrac | ||
| owner: q2d2 | ||
| - name: qiime2__diversity_lib__weighted_unifrac | ||
| owner: q2d2 | ||
| - name: qiime2__emperor__biplot | ||
| owner: q2d2 | ||
| - name: qiime2__emperor__plot | ||
| owner: q2d2 | ||
| - name: qiime2__emperor__procrustes_plot | ||
| owner: q2d2 | ||
| - name: qiime2__feature_classifier__blast | ||
| owner: q2d2 | ||
| - name: qiime2__feature_classifier__classify_consensus_blast | ||
| owner: q2d2 | ||
| - name: qiime2__feature_classifier__classify_consensus_vsearch | ||
| owner: q2d2 | ||
| - name: qiime2__feature_classifier__classify_hybrid_vsearch_sklearn | ||
| owner: q2d2 | ||
| - name: qiime2__feature_classifier__classify_sklearn | ||
| owner: q2d2 | ||
| - name: qiime2__feature_classifier__extract_reads | ||
| owner: q2d2 | ||
| - name: qiime2__feature_classifier__find_consensus_annotation | ||
| owner: q2d2 | ||
| - name: qiime2__feature_classifier__fit_classifier_naive_bayes | ||
| owner: q2d2 | ||
| - name: qiime2__feature_classifier__fit_classifier_sklearn | ||
| owner: q2d2 | ||
| - name: qiime2__feature_classifier__vsearch_global | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__core_features | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__filter_features | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__filter_features_conditionally | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__filter_samples | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__filter_seqs | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__group | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__heatmap | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__merge | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__merge_seqs | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__merge_taxa | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__presence_absence | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__rarefy | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__relative_frequency | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__rename_ids | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__subsample | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__summarize | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__tabulate_seqs | ||
| owner: q2d2 | ||
| - name: qiime2__feature_table__transpose | ||
| owner: q2d2 | ||
| - name: qiime2__fragment_insertion__classify_otus_experimental | ||
| owner: q2d2 | ||
| - name: qiime2__fragment_insertion__filter_features | ||
| owner: q2d2 | ||
| - name: qiime2__fragment_insertion__sepp | ||
| owner: q2d2 | ||
| - name: qiime2__gneiss__assign_ids | ||
| owner: q2d2 | ||
| - name: qiime2__gneiss__correlation_clustering | ||
| owner: q2d2 | ||
| - name: qiime2__gneiss__dendrogram_heatmap | ||
| owner: q2d2 | ||
| - name: qiime2__gneiss__gradient_clustering | ||
| owner: q2d2 | ||
| - name: qiime2__gneiss__ilr_hierarchical | ||
| owner: q2d2 | ||
| - name: qiime2__gneiss__ilr_phylogenetic | ||
| owner: q2d2 | ||
| - name: qiime2__gneiss__ilr_phylogenetic_differential | ||
| owner: q2d2 | ||
| - name: qiime2__gneiss__ilr_phylogenetic_ordination | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__anova | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__feature_volatility | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__first_differences | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__first_distances | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__linear_mixed_effects | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__maturity_index | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__nmit | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__pairwise_differences | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__pairwise_distances | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__plot_feature_volatility | ||
| owner: q2d2 | ||
| - name: qiime2__longitudinal__volatility | ||
| owner: q2d2 | ||
| - name: qiime2__metadata__distance_matrix | ||
| owner: q2d2 | ||
| - name: qiime2__metadata__shuffle_groups | ||
| owner: q2d2 | ||
| - name: qiime2__metadata__tabulate | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__align_to_tree_mafft_fasttree | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__align_to_tree_mafft_iqtree | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__align_to_tree_mafft_raxml | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__fasttree | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__filter_table | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__filter_tree | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__iqtree | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__iqtree_ultrafast_bootstrap | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__midpoint_root | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__raxml | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__raxml_rapid_bootstrap | ||
| owner: q2d2 | ||
| - name: qiime2__phylogeny__robinson_foulds | ||
| owner: q2d2 | ||
| - name: qiime2__quality_control__bowtie2_build | ||
| owner: q2d2 | ||
| - name: qiime2__quality_control__evaluate_composition | ||
| owner: q2d2 | ||
| - name: qiime2__quality_control__evaluate_seqs | ||
| owner: q2d2 | ||
| - name: qiime2__quality_control__evaluate_taxonomy | ||
| owner: q2d2 | ||
| - name: qiime2__quality_control__exclude_seqs | ||
| owner: q2d2 | ||
| - name: qiime2__quality_control__filter_reads | ||
| owner: q2d2 | ||
| - name: qiime2__quality_filter__q_score | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__classify_samples | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__classify_samples_from_dist | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__classify_samples_ncv | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__confusion_matrix | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__fit_classifier | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__fit_regressor | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__heatmap | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__metatable | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__predict_classification | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__predict_regression | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__regress_samples | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__regress_samples_ncv | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__scatterplot | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__split_table | ||
| owner: q2d2 | ||
| - name: qiime2__sample_classifier__summarize | ||
| owner: q2d2 | ||
| - name: qiime2__taxa__barplot | ||
| owner: q2d2 | ||
| - name: qiime2__taxa__collapse | ||
| owner: q2d2 | ||
| - name: qiime2__taxa__filter_seqs | ||
| owner: q2d2 | ||
| - name: qiime2__taxa__filter_table | ||
| owner: q2d2 | ||
| - name: qiime2__vsearch__cluster_features_closed_reference | ||
| owner: q2d2 | ||
| - name: qiime2__vsearch__cluster_features_de_novo | ||
| owner: q2d2 | ||
| - name: qiime2__vsearch__cluster_features_open_reference | ||
| owner: q2d2 | ||
| - name: qiime2__vsearch__dereplicate_sequences | ||
| owner: q2d2 | ||
| - name: qiime2__vsearch__fastq_stats | ||
| owner: q2d2 | ||
| - name: qiime2__vsearch__merge_pairs | ||
| owner: q2d2 | ||
| - name: qiime2__vsearch__uchime_denovo | ||
| owner: q2d2 | ||
| - name: qiime2__vsearch__uchime_ref | ||
| owner: q2d2 | ||
| - name: qiime2_core__tools__export | ||
| owner: q2d2 | ||
| - name: qiime2_core__tools__import | ||
| owner: q2d2 |
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