Merge pull request #6570 from SaimMomin12/tools/abyss

Fixing linting issues and updating tools/abyss

tools/abyss/abyss-pe.xml

@@ -1,7 +1,7 @@
-<tool id="abyss-pe" name="ABySS" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
+<tool id="abyss-pe" name="ABySS" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="23.02" license="GPL-3.0">
     <description>de novo sequence assembler</description>
     <macros>
-        <token name="@TOOL_VERSION@">2.3.9</token>
+        <token name="@TOOL_VERSION@">2.3.10</token>
         <token name="@VERSION_SUFFIX@">0</token>
         <xml name="reads_conditional">
             <conditional name="reads">
@@ -281,12 +281,9 @@ This tool performs the complete ABySS pipeline using abyss-pe, described in http
 
 **License and citation**
 
-This Galaxy tool is Copyright © 2015-2021 `Earlham Institute`_ and is released under the `MIT license`_.
+This Galaxy tool is Copyright © 2015-2021 `Earlham Institute`_
 
 .. _Earlham Institute: http://www.earlham.ac.uk/
-.. _MIT license: https://opensource.org/licenses/MIT
-
-You can use this tool only if you agree to the license terms of: `ABySS`_.
 
 .. _ABySS: https://github.com/bcgsc/abyss
     ]]></help>