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Explicitly add cwl-utils to dependencies #19257

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merged 1 commit into from
Dec 5, 2024
Merged

Explicitly add cwl-utils to dependencies #19257

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2 changes: 1 addition & 1 deletion lib/galaxy_ext/expressions/handle_job.py
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Expand Up @@ -27,7 +27,7 @@

def run(environment_path=None):
if expression is None:
raise Exception("Python library cwltool must be available to evaluate expressions.")
raise Exception("Python library cwl-utils must be available to evaluate expressions.")

if environment_path is None:
environment_path = os.environ.get("GALAXY_EXPRESSION_INPUTS")
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1 change: 1 addition & 0 deletions packages/app/setup.cfg
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Expand Up @@ -49,6 +49,7 @@ install_requires =
bx-python
celery
cloudauthz==0.6.0
cwl-utils
dparse
gxformat2
kombu>=5.3
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1 change: 1 addition & 0 deletions pyproject.toml
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Expand Up @@ -30,6 +30,7 @@ dependencies = [
"circus",
"conda-package-streaming",
"CT3>=3.3.3", # Python 3.13 support
"cwl-utils>=0.13",
"cwltool>=3.1.20230624081518", # save time, minimum needed by cwl-1.0 branch
"dictobj",
"dnspython",
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