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Migrate another collection flatten workflow test to workflow test fra…
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19 changes: 19 additions & 0 deletions
19
lib/galaxy_test/workflow/flatten_collection_over_execution.gxwf-tests.yml
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- doc: | | ||
Test to verify collection flatten collection operation mid workflow. | ||
job: | ||
input_fastqs: | ||
collection_type: list | ||
elements: | ||
- identifier: samp1 | ||
content: "0 mycoolline\n1 mysecondline\n" | ||
outputs: | ||
out: | ||
elements: | ||
'samp1-0': | ||
asserts: | ||
- that: has_text | ||
text: "mycoolline" | ||
'samp1-1': | ||
asserts: | ||
- that: has_text | ||
text: "mysecondline" |
17 changes: 17 additions & 0 deletions
17
lib/galaxy_test/workflow/flatten_collection_over_execution.gxwf.yml
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class: GalaxyWorkflow | ||
inputs: | ||
input_fastqs: collection | ||
outputs: | ||
out: | ||
outputSource: flatten/output | ||
steps: | ||
split_up: | ||
tool_id: collection_split_on_column | ||
in: | ||
input1: input_fastqs | ||
flatten: | ||
tool_id: '__FLATTEN__' | ||
state: | ||
join_identifier: '-' | ||
in: | ||
input: split_up/split_output |