More, better workflow editor Selenium tests - part 2.

- More stuff tested: - Connecting and disconnecting simple terminals as well as mapping terminals (ribbons). - Rendering simple workflows, workflow with output collections, workflow with mapping, and workflow with a subworkflow. - Collapsing side panels in the workflow editor. - Small tweaks to editor DOM. - More screenshots.
galaxyproject · Apr 12, 2018 · c63f562 · c63f562
1 parent 1583db7
commit c63f562
Show file tree

Hide file tree

Showing 10 changed files with 299 additions and 138 deletions.
diff --git a/client/galaxy/scripts/mvc/workflow/workflow-connector.js b/client/galaxy/scripts/mvc/workflow/workflow-connector.js
@@ -35,6 +35,9 @@ $.extend(Connector.prototype, {
     redraw: function() {
         const handle1 = this.handle1;
         const handle2 = this.handle2;
+        const startRibbon = handle1 && handle1.isMappedOver();
+        const endRibbon = handle2 && handle2.isMappedOver();
+        const canvasClass = `${startRibbon ? "start-ribbon" : ""} ${endRibbon ? "end-ribbon" : ""}`;
         var canvas_container = $("#canvas-container");
         if (!this.canvas) {
             this.canvas = document.createElement("canvas");
@@ -71,6 +74,7 @@ $.extend(Connector.prototype, {
         this.canvas.style.top = `${canvas_top}px`;
         this.canvas.setAttribute("width", canvas_width);
         this.canvas.setAttribute("height", canvas_height);
+        this.canvas.setAttribute("class", canvasClass);
         // Adjust points to be relative to the canvas
         start_x -= canvas_left;
         start_y -= canvas_top;
@@ -84,13 +88,13 @@ $.extend(Connector.prototype, {
         var start_offsets = null;
         var end_offsets = null;
         var num_offsets = 1;
-        if (handle1 && handle1.isMappedOver()) {
+        if (startRibbon) {
             var start_offsets = [-6, -3, 0, 3, 6];
             num_offsets = 5;
         } else {
             var start_offsets = [0];
         }
-        if (handle2 && handle2.isMappedOver()) {
+        if (endRibbon) {
             var end_offsets = [-6, -3, 0, 3, 6];
             num_offsets = 5;
         } else {

diff --git a/client/galaxy/scripts/mvc/workflow/workflow-view-terminals.js b/client/galaxy/scripts/mvc/workflow/workflow-view-terminals.js
@@ -72,7 +72,7 @@ var BaseInputTerminalView = TerminalView.extend({
         const node = options.node;
         const input = options.input;
         const name = input.name;
-        const id = `node-${node.id}-input-${name}`;
+        const id = `node-${node.cid}-input-${name}`;
         const terminal = this.terminalForInput(input);
         if (!terminal.multiple) {
             this.setupMappingView(terminal);
@@ -179,7 +179,7 @@ var BaseOutputTerminalView = TerminalView.extend({
         const node = options.node;
         const output = options.output;
         const name = output.name;
-        const id = `node-${node.id}-output-${name}`;
+        const id = `node-${node.cid}-output-${name}`;
         const terminal = this.terminalForOutput(output);
         this.setupMappingView(terminal);
         this.el.terminal = terminal;

diff --git a/templates/base/base_panels.mako b/templates/base/base_panels.mako
@@ -223,8 +223,8 @@
                 <div id="left">
                     ${self.left_panel()}
                     <div class="unified-panel-footer">
-                        <div class="panel-collapse"></div>
-                        <div class="drag"></div>
+                        <div id="left-panel-collapse" class="panel-collapse"></div>
+                        <div id="left-panel-drag" class="drag"></div>
                     </div>
                 </div><!--end left-->
             %endif
@@ -235,8 +235,8 @@
                 <div id="right">
                     ${self.right_panel()}
                     <div class="unified-panel-footer">
-                        <div class="panel-collapse right"></div>
-                        <div class="drag"></div>
+                        <div id="right-panel-collapse" class="panel-collapse right"></div>
+                        <div id="right-panel-drag" class="drag"></div>
                     </div>
                 </div><!--end right-->
             %endif

diff --git a/templates/webapps/galaxy/galaxy.panels.mako b/templates/webapps/galaxy/galaxy.panels.mako
@@ -209,8 +209,8 @@
                     </div>
                     <div class="unified-panel-body" style="overflow: auto;"></div>
                     <div class="unified-panel-footer">
-                        <div class="panel-collapse right"></span></div>
-                        <div class="drag"></div>
+                        <div id="left-panel-collapse" class="panel-collapse right"></span></div>
+                        <div id="left-panel-drag" class="drag"></div>
                     </div>
                 </div>
             %endif
@@ -237,8 +237,8 @@
                     </div>
                     <div class="unified-panel-body" style="overflow: auto;"></div>
                     <div class="unified-panel-footer">
-                        <div class="panel-collapse right"></span></div>
-                        <div class="drag"></div>
+                        <div id="right-panel-collapse" class="panel-collapse right"></span></div>
+                        <div id="right-panel-drag"  class="drag"></div>
                     </div>
                 </div>
             %endif

diff --git a/test/api/test_workflows.py b/test/api/test_workflows.py
@@ -18,54 +18,15 @@
     wait_on,
     WorkflowPopulator
 )
+from base.workflow_fixtures import (  # noqa: I100
+    WORKFLOW_NESTED_SIMPLE,
+    WORKFLOW_WITH_OUTPUT_COLLECTION,
+    WORKFLOW_WITH_OUTPUT_COLLECTION_MAPPING,
+)
 from galaxy.exceptions import error_codes  # noqa: I201
 from galaxy.tools.verify.test_data import TestDataResolver
 
 
-SIMPLE_NESTED_WORKFLOW_YAML = """
-class: GalaxyWorkflow
-inputs:
-  - id: outer_input
-outputs:
-  - id: outer_output
-    source: second_cat#out_file1
-steps:
-  - tool_id: cat1
-    label: first_cat
-    state:
-      input1:
-        $link: outer_input
-  - run:
-      class: GalaxyWorkflow
-      inputs:
-        - id: inner_input
-      outputs:
-        - id: workflow_output
-          source: random_lines#out_file1
-      steps:
-        - tool_id: random_lines1
-          label: random_lines
-          state:
-            num_lines: 1
-            input:
-              $link: inner_input
-            seed_source:
-              seed_source_selector: set_seed
-              seed: asdf
-    label: nested_workflow
-    connect:
-      inner_input: first_cat#out_file1
-  - tool_id: cat1
-    label: second_cat
-    state:
-      input1:
-        $link: nested_workflow#workflow_output
-      queries:
-        - input2:
-            $link: nested_workflow#workflow_output
-"""
-
-
 class BaseWorkflowsApiTestCase(api.ApiTestCase):
     # TODO: Find a new file for this class.
 
@@ -474,7 +435,7 @@ def get_subworkflow_content_id(workflow_id):
             subworkflow_step = next(s for s in steps.values() if s["type"] == "subworkflow")
             return subworkflow_step['content_id']
 
-        workflow_id = self._upload_yaml_workflow(SIMPLE_NESTED_WORKFLOW_YAML, publish=True)
+        workflow_id = self._upload_yaml_workflow(WORKFLOW_NESTED_SIMPLE, publish=True)
         subworkflow_content_id = get_subworkflow_content_id(workflow_id)
         with self._different_user():
             other_import_response = self.__import_workflow(workflow_id)
@@ -633,21 +594,7 @@ def __run_cat_workflow(self, inputs_by):
 
     @skip_without_tool("collection_creates_pair")
     def test_workflow_run_output_collections(self):
-        workflow_id = self._upload_yaml_workflow("""
-class: GalaxyWorkflow
-steps:
-  - label: text_input
-    type: input
-  - label: split_up
-    tool_id: collection_creates_pair
-    state:
-      input1:
-        $link: text_input
-  - tool_id: collection_paired_test
-    state:
-      f1:
-        $link: split_up#paired_output
-""")
+        workflow_id = self._upload_yaml_workflow(WORKFLOW_WITH_OUTPUT_COLLECTION)
         with self.dataset_populator.test_history() as history_id:
             hda1 = self.dataset_populator.new_dataset(history_id, content="a\nb\nc\nd\n")
             inputs = {
@@ -779,23 +726,7 @@ def test_workflow_resume_with_mapped_over_input(self):
 
     @skip_without_tool("collection_creates_pair")
     def test_workflow_run_output_collection_mapping(self):
-        workflow_id = self._upload_yaml_workflow("""
-class: GalaxyWorkflow
-steps:
-  - type: input_collection
-  - tool_id: collection_creates_pair
-    state:
-      input1:
-        $link: 0
-  - tool_id: collection_paired_test
-    state:
-      f1:
-        $link: 1#paired_output
-  - tool_id: cat_list
-    state:
-      input1:
-        $link: 2#out1
-""")
+        workflow_id = self._upload_yaml_workflow(WORKFLOW_WITH_OUTPUT_COLLECTION_MAPPING)
         with self.dataset_populator.test_history() as history_id:
             hdca1 = self.dataset_collection_populator.create_list_in_history(history_id, contents=["a\nb\nc\nd\n", "e\nf\ng\nh\n"]).json()
             self.dataset_populator.wait_for_history(history_id, assert_ok=True)
@@ -990,7 +921,7 @@ def test_run_subworkflow_simple(self):
   outer_input:
     value: 1.bed
     type: File
-""" % SIMPLE_NESTED_WORKFLOW_YAML
+""" % WORKFLOW_NESTED_SIMPLE
             self._run_jobs(workflow_run_description, history_id=history_id)
 
             content = self.dataset_populator.get_history_dataset_content(history_id)
@@ -1266,7 +1197,7 @@ def test_workflow_run_input_mapping_with_subworkflows(self):
       - identifier: el2
         value: 1.fastq
         type: File
-""" % SIMPLE_NESTED_WORKFLOW_YAML, history_id=history_id)
+""" % WORKFLOW_NESTED_SIMPLE, history_id=history_id)
             workflow_id = summary.workflow_id
             invocation_id = summary.invocation_id
             invocation_response = self._get("workflows/%s/invocations/%s" % (workflow_id, invocation_id))
@@ -1856,7 +1787,7 @@ def test_nested_workflow_rerun_with_use_cached_job(self):
   outer_input:
     value: 1.bed
     type: File
-""" % SIMPLE_NESTED_WORKFLOW_YAML
+""" % WORKFLOW_NESTED_SIMPLE
             run_jobs_summary = self._run_jobs(workflow_run_description, history_id=history_id_one)
             self.dataset_populator.wait_for_history(history_id_one, assert_ok=True)
             workflow_request = run_jobs_summary.workflow_request

diff --git a/test/base/workflow_fixtures.py b/test/base/workflow_fixtures.py
@@ -0,0 +1,134 @@
+
+WORKFLOW_SIMPLE_CAT_TWICE = """
+class: GalaxyWorkflow
+inputs:
+  - id: input1
+steps:
+  - tool_id: cat
+    label: first_cat
+    state:
+      input1:
+        $link: input1
+      queries:
+        - input2:
+            $link: input1
+"""
+
+
+WORKFLOW_WITH_OLD_TOOL_VERSION = """
+class: GalaxyWorkflow
+inputs:
+  - id: input1
+steps:
+  - tool_id: multiple_versions
+    tool_version: "0.0.1"
+    state:
+      inttest: 8
+"""
+
+
+WORKFLOW_WITH_INVALID_STATE = """
+class: GalaxyWorkflow
+inputs:
+  - id: input1
+steps:
+  - tool_id: multiple_versions
+    tool_version: "0.0.1"
+    state:
+      inttest: "moocow"
+"""
+
+
+WORKFLOW_WITH_OUTPUT_COLLECTION = """
+class: GalaxyWorkflow
+steps:
+  - label: text_input
+    type: input
+  - label: split_up
+    tool_id: collection_creates_pair
+    state:
+      input1:
+        $link: text_input
+  - tool_id: collection_paired_test
+    state:
+      f1:
+        $link: split_up#paired_output
+"""
+
+
+WORKFLOW_SIMPLE_MAPPING = """
+class: GalaxyWorkflow
+inputs:
+  - id: input1
+    type: data_collection_input
+    collection_type: list
+steps:
+  - tool_id: cat
+    label: cat
+    state:
+      input1:
+        $link: input1
+"""
+
+
+WORKFLOW_WITH_OUTPUT_COLLECTION_MAPPING = """
+class: GalaxyWorkflow
+steps:
+  - type: input_collection
+  - tool_id: collection_creates_pair
+    state:
+      input1:
+        $link: 0
+  - tool_id: collection_paired_test
+    state:
+      f1:
+        $link: 1#paired_output
+  - tool_id: cat_list
+    state:
+      input1:
+        $link: 2#out1
+"""
+
+
+WORKFLOW_NESTED_SIMPLE = """
+class: GalaxyWorkflow
+inputs:
+  - id: outer_input
+outputs:
+  - id: outer_output
+    source: second_cat#out_file1
+steps:
+  - tool_id: cat1
+    label: first_cat
+    state:
+      input1:
+        $link: outer_input
+  - run:
+      class: GalaxyWorkflow
+      inputs:
+        - id: inner_input
+      outputs:
+        - id: workflow_output
+          source: random_lines#out_file1
+      steps:
+        - tool_id: random_lines1
+          label: random_lines
+          state:
+            num_lines: 1
+            input:
+              $link: inner_input
+            seed_source:
+              seed_source_selector: set_seed
+              seed: asdf
+    label: nested_workflow
+    connect:
+      inner_input: first_cat#out_file1
+  - tool_id: cat1
+    label: second_cat
+    state:
+      input1:
+        $link: nested_workflow#workflow_output
+      queries:
+        - input2:
+            $link: nested_workflow#workflow_output
+"""