Also mark direct HDCA outputs as skipped

galaxyproject · Aug 30, 2024 · 96e7487 · 96e7487
1 parent 4667cec
commit 96e7487
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/lib/galaxy/tools/actions/__init__.py b/lib/galaxy/tools/actions/__init__.py
@@ -681,6 +681,7 @@ def handle_output(name, output, hidden=None):
                 output_collection.mark_as_populated()
             for hdca in output_collections.out_collection_instances.values():
                 hdca.visible = False
+                hdca.collection.mark_as_populated()
             object_store_populator = ObjectStorePopulator(trans.app, trans.user)
             for data in out_data.values():
                 data.set_skipped(object_store_populator)