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Added 4dn_pairs and 4dn_pairsam datatypes
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SaimMomin12 committed Apr 2, 2024
1 parent c88d285 commit 2b42faf
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2 changes: 2 additions & 0 deletions lib/galaxy/config/sample/datatypes_conf.xml.sample
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<converter file="interval_to_bgzip_converter.xml" target_datatype="bgzip"/>
<converter file="bed_gff_or_vcf_to_bigwig_converter.xml" target_datatype="bigwig"/>
</datatype>
<datatype extension="4dn_pairs" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" description="The pairs format is a standard text format for pairs of genomic loci given as 1bp point positions" description_url="https://github.com/4dn-dcic/pairix/blob/master/pairs_format_specification.md#pairs-file"/>
<datatype extension="4dn_pairsam" type="galaxy.datatypes.tabular:Tabular" subclass="true" display_in_upload="true" description="A simple tabular format to store the information on ligation junctions detected in sequences from Hi-C experiments." description_url="https://pairsamtools.readthedocs.io/en/latest/pairsam.html"/>
<datatype extension="pdf" type="galaxy.datatypes.images:Pdf" mimetype="application/pdf" display_in_upload="true"/>
<datatype extension="pileup" type="galaxy.datatypes.tabular:Pileup" display_in_upload="true">
<converter file="interval_to_bgzip_converter.xml" target_datatype="bgzip"/>
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