[24.1] Fix extract workflow from history when implicit collection has no jobs #16054
Workflow file for this run
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name: CWL conformance | |
on: | |
push: | |
paths-ignore: | |
- 'client/**' | |
- 'doc/**' | |
pull_request: | |
paths-ignore: | |
- 'client/**' | |
- 'doc/**' | |
env: | |
GALAXY_TEST_DBURI: 'postgresql://postgres:postgres@localhost:5432/galaxy?client_encoding=utf8' | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
test: | |
name: Test | |
if: ${{ false }} | |
runs-on: ubuntu-latest | |
continue-on-error: ${{ startsWith(matrix.marker, 'red') }} | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ['3.8'] | |
marker: ['green', 'red and required', 'red and not required'] | |
conformance-version: ['cwl_conformance_v1_0'] #, 'cwl_conformance_v1_1', 'cwl_conformance_v1_2'] | |
services: | |
postgres: | |
image: postgres:13 | |
env: | |
POSTGRES_USER: postgres | |
POSTGRES_PASSWORD: postgres | |
POSTGRES_DB: postgres | |
ports: | |
- 5432:5432 | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
path: 'galaxy root' | |
- uses: actions/setup-node@v4 | |
with: | |
node-version: '18.12.1' | |
cache: 'yarn' | |
cache-dependency-path: 'galaxy root/client/yarn.lock' | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Get full Python version | |
id: full-python-version | |
shell: bash | |
run: echo "version=$(python -c 'import sys; print("-".join(str(v) for v in sys.version_info))')" >> $GITHUB_OUTPUT | |
- name: Cache pip dir | |
uses: actions/cache@v4 | |
with: | |
path: ~/.cache/pip | |
key: pip-cache-${{ matrix.python-version }}-${{ hashFiles('galaxy root/requirements.txt') }} | |
- name: Cache galaxy venv | |
uses: actions/cache@v4 | |
with: | |
path: 'galaxy root/.venv' | |
key: gxy-venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('galaxy root/requirements.txt') }} | |
- name: Run tests | |
run: ./run_tests.sh --coverage --skip_flakey_fails -cwl lib/galaxy_test/api/cwl -- -m "${{ matrix.marker }} and ${{ matrix.conformance-version }}" | |
working-directory: 'galaxy root' | |
- uses: codecov/codecov-action@v3 | |
with: | |
flags: cwl-conformance | |
working-directory: 'galaxy root' | |
- uses: actions/upload-artifact@v4 | |
if: failure() | |
with: | |
name: CWL conformance test results (${{ matrix.python-version }}, ${{ matrix.marker }}, ${{ matrix.conformance-version }}) | |
path: 'galaxy root/run_cwl_tests.html' |