✓ GA4GH Pedigree ✓ PED/LINKAGE ✓ GEDCOM (Cyrillic) ✓ BOADICEA
✓ GA4GH Pedigree ✓ PED/LINKAGE
- Install the tool
git clone [email protected]:GA4GH-Pedigree-Standard/pedigree-tools.git
cd nodejs/
npm install -g
cd ..
You can now use the pedigree-tools cli, for example:
- Convert a pedigree into GA4GH pedigree format from another format
pedigree-tools import --from ped --file examples/simple.ped > test.json
- Convert a pedigree from GA4GH pedigree format to another format
pedigree-tools export --to ped --file test.json > test.ped
It also supports streaming so the round-trip can be done in one line:
cat examples/simple.ped | pedigree-tools import --from ped --file - | pedigree-tools export --to ped --file -