dtProcessing

DTI processing scripts for retrospective data, no topup support.

Pipeline

Assumes ANTs cortical thickness is run on T1 data

preproc/processDTI.pl
connMat/dtConnMatSubj.pl

Longitudinal pipeline

Requires cross-sectional processing and then antsLongitudinalCorticalThickness output

preproc/processDTILongSubj.pl
connMat/dtConnMatSubj.pl