Update: Spectre release workflow for Spectre 0.2.0

.github/workflows/release.yaml

@@ -0,0 +1,48 @@
+name: Publish Python distribution to PyPI and TestPyPI
+on: push
+jobs:
+ build:
+ name: Build distribution 📦
+ runs-on: ubuntu-latest
+
+ steps:
+ - uses: actions/checkout@v4
+ - name: Set up Python
+ uses: actions/setup-python@v4
+ with:
+ python-version: "3.10"
+ - name: Install pypa/build
+ run: >-
+ python3 -m
+ pip install
+ build
+ --user
+ - name: Build a binary wheel and a source tarball
+ run: python3 -m build
+ - name: Store the distribution packages
+ uses: actions/upload-artifact@v3
+ with:
+ name: python-package-distributions
+ path: dist/
+
+ publish-to-pypi:
+ name: >-
+ Publish Python distribution to PyPI
+ if: startsWith(github.ref, 'refs/tags/') # only publish to PyPI on tag pushes
+ needs:
+ - build
+ runs-on: ubuntu-latest
+ environment:
+ name: pypi
+ url: https://pypi.org/p/spectre-cnv # Replace <package-name> with your PyPI project name
+ permissions:
+ id-token: write # IMPORTANT: mandatory for trusted publishing
+
+ steps:
+ - name: Download all the dists
+ uses: actions/download-artifact@v3
+ with:
+ name: python-package-distributions
+ path: dist/
+ - name: Publish distribution 📦 to PyPI
+ uses: pypa/gh-action-pypi-publish@release/v1

setup.py

@@ -1,12 +1,14 @@
 from setuptools import setup, find_packages
 
 setup(
- name='Spectre',
+ name='spectre',
  version='0.2.0',
  packages=find_packages(),
- url='',
- license='',
+ url='https://github.com/fritzsedlazeck/Spectre',
+ license='MIT',
  author='Philippe Sanio',
- author_email='',
- description=''
+ author_email='[email protected]',
+ description='Long read copy number variation (CNV) caller',
+ long_description=open('README.md').read(),
+ long_description_content_type='text/markdown',
 )