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Iss42#43

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DSilva27 wants to merge 11 commits intogpu_simulatorflatironinstitute/cryoSBI:gpu_simulatorfrom iss42flatironinstitute/cryoSBI:iss42Copy head branch name to clipboard

+2,763-310

Commits

Commits on Jul 29, 2023

• include physical information in simulator and implement pdb/traj parser closes #24

  DSilva27

  committed
  d953d01

• replace SIGMA for RES in every instance

  DSilva27

  committed
  2f03b8c

Commits on Aug 11, 2023

• updated all atom branch

  Dingel321

  committed
  2905945

Commits on Aug 17, 2023

• changed code formatting

  Dingel321

  committed
  6fc6c22

Commits on Aug 18, 2023

• fixed bug in traj parser and npewithembedding

  Dingel321

  committed
  b9f8ddb

Commits on Aug 25, 2023

• changed definition of atom sigma to bioEM radius

  Dingel321

  committed
  f4e2481

Commits on Sep 25, 2023

• added embedding nets for all expermental setups

  Dingel321

  committed
  29353ec

• ficed bug in pdb parser

  Dingel321

  committed
  ecf0020

Commits on Sep 29, 2023

• introduced goarse grained lipid bead

  Dingel321

  committed
  d8e708e

• Merge branch 'iss42' of https://github.com/DSilva27/cryo_em_SBI into iss42

  Dingel321

  committed
  7a92214

Commits on Oct 6, 2023

• batched simulator in CryoEmSimulator class

  Dingel321

  committed
  47631ef