Deploying to github.io from @ e3209eb 🚀

flatironinstitute · Aug 2, 2024 · 2f2d002 · 2f2d002
1 parent a490a29
commit 2f2d002
Show file tree

Hide file tree

Showing 313 changed files with 44,675 additions and 0 deletions.
diff --git a/docs/1.2.x/.buildinfo b/docs/1.2.x/.buildinfo
@@ -0,0 +1,4 @@
+# Sphinx build info version 1
+# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
+config: 7a201d19101f0aee67ebc7d218b362de
+tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/docs/1.2.x/.doctrees/ChangeLog.doctree b/docs/1.2.x/.doctrees/ChangeLog.doctree
diff --git a/docs/1.2.x/.doctrees/background.doctree b/docs/1.2.x/.doctrees/background.doctree
diff --git a/docs/1.2.x/.doctrees/documentation.doctree b/docs/1.2.x/.doctrees/documentation.doctree
diff --git a/docs/1.2.x/.doctrees/environment.pickle b/docs/1.2.x/.doctrees/environment.pickle
diff --git a/docs/1.2.x/.doctrees/examples.doctree b/docs/1.2.x/.doctrees/examples.doctree
diff --git a/docs/1.2.x/.doctrees/index.doctree b/docs/1.2.x/.doctrees/index.doctree
diff --git a/docs/1.2.x/.doctrees/install.doctree b/docs/1.2.x/.doctrees/install.doctree
diff --git a/docs/1.2.x/.doctrees/issues.doctree b/docs/1.2.x/.doctrees/issues.doctree
diff --git a/docs/1.2.x/.nojekyll b/docs/1.2.x/.nojekyll
diff --git a/docs/1.2.x/ChangeLog.html b/docs/1.2.x/ChangeLog.html
@@ -0,0 +1,217 @@
+<!DOCTYPE html>
+<html class="writer-html5" lang="en">
+<head>
+  <meta charset="utf-8" />
+  <meta name="viewport" content="width=device-width, initial-scale=1.0" />
+  <title>Changelog &mdash; cppdlr  documentation</title>
+      <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+      <link rel="stylesheet" type="text/css" href="_static/css/custom.css" />
+
+
+  <!--[if lt IE 9]>
+    <script src="_static/js/html5shiv.min.js"></script>
+  <![endif]-->
+
+        <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
+        <script src="_static/jquery.js"></script>
+        <script src="_static/underscore.js"></script>
+        <script src="_static/_sphinx_javascript_frameworks_compat.js"></script>
+        <script src="_static/doctools.js"></script>
+        <script src="_static/sphinx_highlight.js"></script>
+    <script src="_static/js/theme.js"></script>
+    <link rel="index" title="Index" href="genindex.html" />
+    <link rel="search" title="Search" href="search.html" /> 
+</head>
+
+<body class="wy-body-for-nav"> 
+  <div class="wy-grid-for-nav">
+    <nav data-toggle="wy-nav-shift" class="wy-nav-side">
+      <div class="wy-side-scroll">
+        <div class="wy-side-nav-search"  style="background: #7E588A" >
+
+
+
+          <a href="index.html" class="icon icon-home">
+            cppdlr
+          </a>
+              <div class="version">
+                1.1.0
+              </div>
+<div role="search">
+  <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
+    <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />
+    <input type="hidden" name="check_keywords" value="yes" />
+    <input type="hidden" name="area" value="default" />
+  </form>
+</div>
+        </div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu">
+              <p class="caption" role="heading"><span class="caption-text">Contents:</span></p>
+<ul>
+<li class="toctree-l1"><a class="reference internal" href="install.html">Installation</a><ul>
+<li class="toctree-l2"><a class="reference internal" href="install.html#dependencies">Dependencies</a></li>
+<li class="toctree-l2"><a class="reference internal" href="install.html#installation-steps">Installation steps</a></li>
+<li class="toctree-l2"><a class="reference internal" href="install.html#versions">Versions</a></li>
+<li class="toctree-l2"><a class="reference internal" href="install.html#custom-cmake-options">Custom CMake options</a></li>
+<li class="toctree-l2"><a class="reference internal" href="install.html#compiling-with-clang">Compiling with clang</a></li>
+<li class="toctree-l2"><a class="reference internal" href="install.html#note-for-macos-users">Note for MacOS users</a></li>
+</ul>
+</li>
+<li class="toctree-l1"><a class="reference internal" href="background.html">Background</a><ul>
+<li class="toctree-l2"><a class="reference internal" href="background.html#imaginary-time-green-s-functions-and-the-lehmann-representation">Imaginary time Green’s functions and the Lehmann representation</a></li>
+<li class="toctree-l2"><a class="reference internal" href="background.html#discrete-lehmann-representation">Discrete Lehmann representation</a></li>
+<li class="toctree-l2"><a class="reference internal" href="background.html#constructing-a-dlr-expansion">Constructing a DLR expansion</a></li>
+<li class="toctree-l2"><a class="reference internal" href="background.html#dlr-in-the-matsubara-frequency-domain">DLR in the Matsubara frequency domain</a></li>
+<li class="toctree-l2"><a class="reference internal" href="background.html#operations-in-the-dlr-basis">Operations in the DLR basis</a></li>
+<li class="toctree-l2"><a class="reference internal" href="background.html#imaginary-time-point-format">Imaginary time point format</a></li>
+<li class="toctree-l2"><a class="reference internal" href="background.html#matsubara-frequency-point-format">Matsubara frequency point format</a></li>
+<li class="toctree-l2"><a class="reference internal" href="background.html#measuring-error">Measuring error</a></li>
+<li class="toctree-l2"><a class="reference internal" href="background.html#symmetrized-dlr-grids">Symmetrized DLR grids</a></li>
+</ul>
+</li>
+<li class="toctree-l1"><a class="reference internal" href="examples.html">Examples</a><ul>
+<li class="toctree-l2"><a class="reference internal" href="examples.html#example-form-a-dlr-expansion-via-interpolation-and-evaluate-it-in-imaginary-time-and-frequency">Example: form a DLR expansion via interpolation, and evaluate it in imaginary time and frequency</a></li>
+<li class="toctree-l2"><a class="reference internal" href="examples.html#list-of-examples">List of examples</a></li>
+<li class="toctree-l2"><a class="reference internal" href="examples.html#list-of-other-cppdlr-capabilities">List of other <code class="docutils literal notranslate"><span class="pre">cppdlr</span></code> capabilities</a></li>
+</ul>
+</li>
+<li class="toctree-l1"><a class="reference internal" href="documentation.html">Reference documentation</a></li>
+<li class="toctree-l1"><a class="reference internal" href="issues.html">Issues and contributions</a></li>
+</ul>
+
+        </div>
+      </div>
+    </nav>
+
+    <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap"><nav class="wy-nav-top" aria-label="Mobile navigation menu"  style="background: #7E588A" >
+          <i data-toggle="wy-nav-top" class="fa fa-bars"></i>
+          <a href="index.html">cppdlr</a>
+      </nav>
+
+      <div class="wy-nav-content">
+        <div class="rst-content">
+          <div role="navigation" aria-label="Page navigation">
+  <ul class="wy-breadcrumbs">
+      <li><a href="index.html" class="icon icon-home" aria-label="Home"></a></li>
+      <li class="breadcrumb-item active">Changelog</li>
+      <li class="wy-breadcrumbs-aside">
+            <a href="_sources/ChangeLog.md.txt" rel="nofollow"> View page source</a>
+      </li>
+  </ul>
+  <hr/>
+</div>
+          <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
+           <div itemprop="articleBody">
+
+  <div class="tex2jax_ignore mathjax_ignore section" id="changelog">
+<span id="id1"></span><h1>Changelog<a class="headerlink" href="#changelog" title="Permalink to this heading"></a></h1>
+<div class="section" id="version-1-2-0">
+<h2>Version 1.2.0<a class="headerlink" href="#version-1-2-0" title="Permalink to this heading"></a></h2>
+<p>This update contains minor additional functionality, bug fixes, and optimizations.</p>
+<p>We thank all contributors: Jason Kaye, Hugo U. R. Strand, Nils Wentzell</p>
+<div class="section" id="new-features">
+<h3>New features<a class="headerlink" href="#new-features" title="Permalink to this heading"></a></h3>
+<ul class="simple">
+<li>Added imtime_ops::get_ipmat function to expose matrix of imaginary time inner product</li>
+<li>Implemented transpose of values -&gt; coefficients operation in imtime_ops::vals2coefs</li>
+</ul>
+</div>
+<div class="section" id="bug-fixes">
+<h3>Bug fixes<a class="headerlink" href="#bug-fixes" title="Permalink to this heading"></a></h3>
+<ul class="simple">
+<li>Fixed backwards compatibility issue w/ 1.0.x for h5 reading of it2cf_zlu object in imtime_ops</li>
+</ul>
+</div>
+<div class="section" id="optimizations">
+<h3>Optimizations<a class="headerlink" href="#optimizations" title="Permalink to this heading"></a></h3>
+<ul class="simple">
+<li>imtime_ops::inner_prod function can return double, rather than always complex double</li>
+</ul>
+</div>
+<div class="section" id="other-changes">
+<h3>Other changes<a class="headerlink" href="#other-changes" title="Permalink to this heading"></a></h3>
+<ul class="simple">
+<li>Test tolerance adjustments</li>
+<li>Minor documentation updates</li>
+</ul>
+</div>
+</div>
+<div class="section" id="version-1-1-0">
+<h2>Version 1.1.0<a class="headerlink" href="#version-1-1-0" title="Permalink to this heading"></a></h2>
+<p>This update to cppdlr adds significant new functionality, including symmetrized DLR grids, and improvements to ensure accuracy of DLR expansions in L^2(tau) norm (both described in the updated documentation).</p>
+<p>We thank all contributors: Thomas Hahn, Alexander Hampel, Jason Kaye, Henri Menke, Hugo U. R. Strand, Nils Wentzell</p>
+<div class="section" id="id2">
+<h3>New features<a class="headerlink" href="#id2" title="Permalink to this heading"></a></h3>
+<ul class="simple">
+<li>Symmetrized DLR grids, w/ tests to compare symmetrized/non-symmetrized grids</li>
+<li>Documentation updates: symmetrized grids, discussion of error</li>
+<li>Imaginary time quadrature weighting for DLR frequency selection to ensure accuracy in L^2(tau) norm, updated tests accordingly</li>
+<li>Function to compute imaginary time inner products of DLR expansions</li>
+<li>Program to print DLR ranks for various Lambda</li>
+<li>Tests to interpolate in imag time and measure error in imag freq, and vice versa</li>
+<li>Unit tests print errors via fmt</li>
+<li>Implementation of symmetrized pivoted Gram-Schmidt with tolerance or rank specified</li>
+<li>Print warning if user chooses epsilon dangerously small</li>
+<li>Expose fermionic and bosonic Matsubara frequency kernels to user directly</li>
+</ul>
+</div>
+<div class="section" id="id3">
+<h3>Bug fixes<a class="headerlink" href="#id3" title="Permalink to this heading"></a></h3>
+<ul class="simple">
+<li>Fixed bosonic kernel at i*om_n=0</li>
+<li>Fixed bug involving non-contiguous views in vals2coefs implementations</li>
+<li>Fixed bug in error checking of fine discretization of imag time kernel in geterr_k_it</li>
+<li>Fixed uninitialized niom value in dlr_imfreq constructor</li>
+<li>Fixed range bug in imtime_ops.interp_matrix_sym_bos</li>
+</ul>
+</div>
+<div class="section" id="id4">
+<h3>Optimizations<a class="headerlink" href="#id4" title="Permalink to this heading"></a></h3>
+<ul class="simple">
+<li>Make complex copy of <a class="reference external" href="http://it2cf.lu" rel="noopener noreferrer" target="_blank">it2cf.lu</a> in imtime_ops constructor to avoid on-the-fly copies</li>
+<li>imtime_ops::convolve optimizations; use nda::matmul when possible</li>
+</ul>
+</div>
+<div class="section" id="id5">
+<h3>Other changes<a class="headerlink" href="#id5" title="Permalink to this heading"></a></h3>
+<ul class="simple">
+<li>Various code simplifications</li>
+<li>Test tolerance adjustments</li>
+<li>References to cppdlr preprint in documentation and readme</li>
+<li>Merge latest changes of app4triqs skeleton</li>
+<li>Add ubuntu-intel build to jenkins</li>
+</ul>
+</div>
+</div>
+<div class="section" id="version-1-0-0">
+<h2>Version 1.0.0<a class="headerlink" href="#version-1-0-0" title="Permalink to this heading"></a></h2>
+<p>This is the initial release of cppdlr, a C++ library implementing the discrete Lehmann representation of imaginary time Green’s functions.</p>
+<p>We thank all contributors: Thomas Hahn, Jason Kaye, Hugo U. R. Strand, Nils Wentzell</p>
+</div>
+</div>
+
+
+           </div>
+          </div>
+          <footer>
+
+  <hr/>
+
+  <div role="contentinfo">
+    <p>&#169; Copyright 2023 The Simons Foundation, Hugo U.R. Strand. Authors: J. Kaye, N. Wentzell, H. U. R. Strand.</p>
+  </div>
+
+
+
+</footer>
+        </div>
+      </div>
+    </section>
+  </div>
+  <script>
+      jQuery(function () {
+          SphinxRtdTheme.Navigation.enable(true);
+      });
+  </script> 
+
+</body>
+</html>
diff --git a/docs/1.2.x/_images/dlr_rf.png b/docs/1.2.x/_images/dlr_rf.png
diff --git a/docs/1.2.x/_images/gfun.png b/docs/1.2.x/_images/gfun.png
diff --git a/docs/1.2.x/_images/gfun_err_if.png b/docs/1.2.x/_images/gfun_err_if.png
diff --git a/docs/1.2.x/_images/gfun_err_it.png b/docs/1.2.x/_images/gfun_err_it.png
diff --git a/docs/1.2.x/_sources/ChangeLog.md.txt b/docs/1.2.x/_sources/ChangeLog.md.txt
@@ -0,0 +1,67 @@
+(changelog)=
+
+# Changelog
+
+## Version 1.2.0
+
+This update contains minor additional functionality, bug fixes, and optimizations.
+
+We thank all contributors: Jason Kaye, Hugo U. R. Strand, Nils Wentzell
+
+### New features
+* Added imtime_ops::get_ipmat function to expose matrix of imaginary time inner product
+* Implemented transpose of values -> coefficients operation in imtime_ops::vals2coefs 
+
+### Bug fixes
+* Fixed backwards compatibility issue w/ 1.0.x for h5 reading of it2cf_zlu object in imtime_ops 
+
+### Optimizations
+* imtime_ops::inner_prod function can return double, rather than always complex double
+
+### Other changes
+* Test tolerance adjustments
+* Minor documentation updates
+
+
+## Version 1.1.0
+
+This update to cppdlr adds significant new functionality, including symmetrized DLR grids, and improvements to ensure accuracy of DLR expansions in L^2(tau) norm (both described in the updated documentation).
+
+We thank all contributors: Thomas Hahn, Alexander Hampel, Jason Kaye, Henri Menke, Hugo U. R. Strand, Nils Wentzell
+
+### New features
+* Symmetrized DLR grids, w/ tests to compare symmetrized/non-symmetrized grids
+* Documentation updates: symmetrized grids, discussion of error
+* Imaginary time quadrature weighting for DLR frequency selection to ensure accuracy in L^2(tau) norm, updated tests accordingly
+* Function to compute imaginary time inner products of DLR expansions
+* Program to print DLR ranks for various Lambda
+* Tests to interpolate in imag time and measure error in imag freq, and vice versa
+* Unit tests print errors via fmt
+* Implementation of symmetrized pivoted Gram-Schmidt with tolerance or rank specified
+* Print warning if user chooses epsilon dangerously small
+* Expose fermionic and bosonic Matsubara frequency kernels to user directly
+
+### Bug fixes
+* Fixed bosonic kernel at i*om_n=0
+* Fixed bug involving non-contiguous views in vals2coefs implementations
+* Fixed bug in error checking of fine discretization of imag time kernel in geterr_k_it
+* Fixed uninitialized niom value in dlr_imfreq constructor
+* Fixed range bug in imtime_ops.interp_matrix_sym_bos
+
+### Optimizations
+* Make complex copy of it2cf.lu in imtime_ops constructor to avoid on-the-fly copies
+* imtime_ops::convolve optimizations; use nda::matmul when possible
+
+### Other changes
+* Various code simplifications
+* Test tolerance adjustments
+* References to cppdlr preprint in documentation and readme
+* Merge latest changes of app4triqs skeleton
+* Add ubuntu-intel build to jenkins
+
+
+## Version 1.0.0
+
+This is the initial release of cppdlr, a C++ library implementing the discrete Lehmann representation of imaginary time Green's functions.
+
+We thank all contributors: Thomas Hahn, Jason Kaye, Hugo U. R. Strand, Nils Wentzell