update config file to reproduce presentation plots

config_files/config_svd.yaml

@@ -1,19 +1,19 @@
 path_to_volumes: /path/to/volumes
-box_size_ds: 32
+box_size_ds: 128
 submission_list: [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11]
 experiment_mode: "all_vs_ref" # options are "all_vs_all", "all_vs_ref"
 
 # optional unless experiment_mode is "all_vs_ref"
 reference_options:
   path_to_reference: /path/to/reference
-  n_volumes: 300 # optional, default is all volumes
+  n_volumes: 338 # optional, default is all volumes
   random_subset: False # if False, the subset is chosen as volumes[::skip_vols, ...] to satisfy n_volumes
 
 dtype: "float32" # options are "float32", "float64"
 output_options:
   # path will be created if it does not exist
   output_path: /path/to/output
   # whether or not to save the processed volumes (downsampled, normalized, etc.)
-  save_volumes: True
+  save_volumes: False
   # whether or not to save the SVD matrices (U, S, V)
-  save_svd_matrices: True
+  save_svd_matrices: False