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Workflow file for this run

# GHA workflow for running tests.
#
# Largely taken from
# https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
# Please check the link for more detailed instructions
name: Run tests
on: [push]
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Cache pip wheels
uses: actions/cache@v3
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('**/pyproject.toml') }}
restore-keys: |
${{ runner.os }}-pip-
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install .
pip install pytest omegaconf
- name: Get test data from OSF
run: |
mkdir -p data/dataset_2_submissions tests/data/dataset_2_submissions tests/results
wget https://files.osf.io/v1/resources/8h6fz/providers/dropbox/dataset_2_submissions/test_submission_0_n8.pt?download=true -O tests/data/dataset_2_submissions/test_submission_0_n8.pt
wget https://files.osf.io/v1/resources/8h6fz/providers/dropbox/Ground_truth/test_maps_gt_flat_10.pt?download=true -O tests/data/gt_maps_flat_10.pt
wget https://files.osf.io/v1/resources/8h6fz/providers/dropbox/Ground_truth/test_metadata_10.csv?download=true -O tests/data/metadata_10.csv
wget https://files.osf.io/v1/resources/8h6fz/providers/dropbox/Ground_truth/mask_dilated_wide_224x224.mrc?download=true -O data/mask_dilated_wide_224x224.mrc
- name: Test with pytest
run: |
pytest tests/